RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Mmp28Q8CGV8 520 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Slc39a8Q91W10 462 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 OxsmQ9D404 459 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Vstm5Q9D806 199 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Gab1Q9QYY0 695 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Psme4Q5SSW2 1843 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Gm609E9Q573 300 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Rhox4fQ2MDF8 205 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Rhox4cQ2MDG1 205 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Plpp5Q3UMZ3 260 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Frem3Q5H8B9 2123 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Jagn1Q5XKN4 183 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Lcn4Q62472 185 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 DraxinQ6PAL1 343 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Cd3eapQ76KJ5 399 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 PigmQ8C2R7 423 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Nrn1lQ8C4W3 162 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Glo1Q9CPU0 184 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Rhox4aQ9D3I8 205 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Actr10Q9QZB7 417 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 NcdnQ9Z0E0 729 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Pcdh17E9PXF0 1157 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Vmn1r94K7N6X3 305 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 RbpjlO08674 515 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Gabrg2P22723 474 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Nxt2Q3UNA4 142 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 ArhgdigQ62160 225 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Rae1Q8C570 368 aaKnown RBP14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Hus1bQ8K572 276 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Cbx7Q8VDS3 158 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Slc33a1Q99J27 550 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Arl5bQ9D4P0 179 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Isyna1Q9JHU9 557 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Dicer1Q8R418 1916 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Vmn2r30K7N5W1 852 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Vmn2r47K7N709 852 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Slc10a1O08705 362 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Vmn2r89O35199 507 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Prkar1bP12849 381 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Fut4Q11127 433 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Cd55Q61475 390 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Galnt2Q6PB93 570 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Sec14l4Q8R0F9 403 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr633Q8VF02 312 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Polr2hQ923G2 150 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 SmoxQ99K82 555 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Slc25a30Q9CR58 291 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Gal3st1Q9JHE4 423 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 HraslsQ9QZU4 167 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 A0A286YCH8 300 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 3110040M04RikA0A286YDK0 300 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 A0A286YE43 300 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Rnf39A2RT81 352 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr913E9Q716 312 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Hoxb3P09026 433 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Elk1P41969 429 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Tamm41Q3TUH1 337 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Xkr7Q5GH64 580 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Surf4Q64310 269 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr1349Q7TQV1 317 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Cpt1cQ8BGD5 798 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Rdh16f2Q8K3M1 318 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr1008Q8VGC7 313 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Med30Q9CQI9 178 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Otud1Q9CUB6 454 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 BambiQ9D0L6 260 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr27Q9EQ90 311 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Rtp4Q9ER80 249 aaKnown RBP14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Ms4a4bQ9ES61 226 aa14.25□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Lilra6A0A0B4J1F3 663 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Tmem156A0A1D5RLR8 321 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Ndufaf5A2APY7 343 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Cyb5aP56395 134 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Npy1rQ04573 382 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Gal3st2cQ3ULK5 396 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Pld6Q5SWZ9 221 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Mc2rQ64326 296 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Arl11Q6P3A9 176 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 PurgQ8R4E6 350 aaKnown RBP14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Erlec1Q8VEH8 483 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr648Q8VG19 316 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Gm13102A2ASJ3 519 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Gpr31F8VQN3 319 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Irf2P23906 349 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Rab3aP63011 220 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 C1qaP98086 245 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Grxcr2Q3TYR5 254 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Csnk2a1Q60737 391 aaKnown RBP14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr1225Q7TR01 311 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Q8C3I9 435 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Rnf170Q8CBG9 286 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Nupl2Q8CIC2 420 aaKnown RBP14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Katnal1Q8K0T4 488 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr734Q8VFT4 313 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Raf1Q99N57 648 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr1018A2ASV3 311 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Lef1P27782 397 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 NcanP55066 1268 aa14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Pcbp3P57722 371 aaKnown RBP14.24□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr331Q5NC44 324 aa14.24□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 50.1 ms