RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 SLAMF6Q96DU3 332 aa8.62□□□□□ -1.03
PHGDH-215ENST00000641371 MAP6Q96JE9 813 aa8.62□□□□□ -1.03
PHGDH-215ENST00000641371 DERL3Q96Q80 235 aa8.62□□□□□ -1.03
PHGDH-215ENST00000641371 UCN2Q96RP3 112 aa8.62□□□□□ -1.03
PHGDH-215ENST00000641371 BARHL1Q9BZE3 327 aa8.62□□□□□ -1.03
PHGDH-215ENST00000641371 TPK1Q9H3S4 243 aa8.62□□□□□ -1.03
PHGDH-215ENST00000641371 ZCCHC4Q9H5U6 513 aa8.62□□□□□ -1.03
PHGDH-215ENST00000641371 EXO5Q9H790 373 aa8.62□□□□□ -1.03
PHGDH-215ENST00000641371 BCO1Q9HAY6 547 aa8.62□□□□□ -1.03
PHGDH-215ENST00000641371 TCF7L1Q9HCS4 588 aa8.62□□□□□ -1.03
PHGDH-215ENST00000641371 DDX28Q9NUL7 540 aaKnown RBP8.62□□□□□ -1.03
PHGDH-215ENST00000641371 FRRS1LQ9P0K9 344 aa8.62□□□□□ -1.03
PHGDH-215ENST00000641371 DKK4Q9UBT3 224 aa8.62□□□□□ -1.03
PHGDH-215ENST00000641371 PLEKHB1Q9UF11 243 aaPredicted RBP8.62□□□□□ -1.03
PHGDH-215ENST00000641371 ATPIF1Q9UII2 106 aa8.62□□□□□ -1.03
PHGDH-215ENST00000641371 GDF2Q9UK05 429 aaPredicted RBP8.62□□□□□ -1.03
PHGDH-215ENST00000641371 HHLA2Q9UM44 414 aa8.62□□□□□ -1.03
PHGDH-215ENST00000641371 FOXJ3Q9UPW0 622 aa8.62□□□□□ -1.03
PHGDH-215ENST00000641371 GRIP1Q9Y3R0 1128 aa8.62□□□□□ -1.03
PHGDH-215ENST00000641371 PTPRZ1P23471 2315 aaPredicted RBP8.62□□□□□ -1.03
PHGDH-215ENST00000641371 CACNA1CQ13936 2221 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 CEP250Q9BV73 2442 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 ZFHX2Q9C0A1 2572 aaPredicted RBP8.61□□□□□ -1.03
PHGDH-215ENST00000641371 A0A1B0GVC2 190 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 TMEM269A0A1B0GVZ9 245 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 AQP7O14520 342 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 KLK10O43240 276 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 RAMP1O60894 148 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 MRPL33O75394 65 aaKnown RBP8.61□□□□□ -1.03
PHGDH-215ENST00000641371 TPPPO94811 219 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 FARS2O95363 451 aaKnown RBP8.61□□□□□ -1.03
PHGDH-215ENST00000641371 F10P00742 488 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 CST2P09228 141 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 SRMP19623 302 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 FSTP19883 344 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 CFPP27918 469 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 NANOS3P60323 173 aaKnown RBP8.61□□□□□ -1.03
PHGDH-215ENST00000641371 RPS11P62280 158 aaKnown RBP eCLIP8.61□□□□□ -1.03
PHGDH-215ENST00000641371 RGS21Q2M5E4 152 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 WDR38Q5JTN6 314 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 BCL2L15Q5TBC7 163 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 FAM27BQ5VT28 67 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 CARD17Q5XLA6 110 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 OR7E24Q6IFN5 339 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 RPUSD3Q6P087 351 aaKnown RBP8.61□□□□□ -1.03
PHGDH-215ENST00000641371 SFXN4Q6P4A7 337 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 LRFN4Q6PJG9 635 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 GDPD1Q8N9F7 314 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 ZIC4Q8N9L1 334 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 C15orf40Q8WUR7 153 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 SARAFQ96BY9 339 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 ZNF385AQ96PM9 386 aaKnown RBP8.61□□□□□ -1.03
PHGDH-215ENST00000641371 SH3GL3Q99963 347 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 KCNS3Q9BQ31 491 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 PDCD1LG2Q9BQ51 273 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 HES7Q9BYE0 225 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 TTTY10Q9BZA0 68 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 HDHD2Q9H0R4 259 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 SLC6A15Q9H2J7 730 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 SLCO5A1Q9H2Y9 848 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 OR52A1Q9UKL2 312 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 DHDHQ9UQ10 334 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 SSUH2Q9Y2M2 353 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 NOSIPQ9Y314 301 aaKnown RBP8.61□□□□□ -1.03
PHGDH-215ENST00000641371 SPEGQ15772 3267 aa8.61□□□□□ -1.03
PHGDH-215ENST00000641371 TRBV5-7A0A0A0MS05 114 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 IGHV3-15A0A0B4J1V0 119 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 IGKV1D-43A0A0B4J1Z2 117 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 OR14I1A6ND48 311 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 PRR32B1ATL7 298 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 MKRN2OSH3BPM6 223 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 RPL36A-HNRNPH2H7BZ11 118 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 AIPO00170 330 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 PSMD9O00233 223 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 EFSO43281 561 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 SRSF10O75494 262 aaKnown RBP8.6□□□□□ -1.03
PHGDH-215ENST00000641371 UPK1BO75841 260 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 KRT33AO76009 404 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 ITGB2P05107 769 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 YES1P07947 543 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 TNFSF8P32971 234 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 STARP49675 285 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 SELENOPP49908 381 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 UCNP55089 124 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 HIST1H3AP68431 136 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 RIN1Q13671 783 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 ZNF169Q14929 603 aaPredicted RBP8.6□□□□□ -1.03
PHGDH-215ENST00000641371 HIST2H3PS2Q5TEC6 136 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 XKRXQ6PP77 449 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 HIST2H3AQ71DI3 136 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.6□□□□□ -1.03
PHGDH-215ENST00000641371 PARP16Q8N5Y8 322 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 NKAIN3Q8N8D7 197 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 SETD6Q8TBK2 473 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 TSEN15Q8WW01 171 aaKnown RBP8.6□□□□□ -1.03
PHGDH-215ENST00000641371 SPTSSAQ969W0 71 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 FOXRED1Q96CU9 486 aaPredicted RBP8.6□□□□□ -1.03
PHGDH-215ENST00000641371 C10orf35Q96D05 121 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 OR14A2Q96R54 314 aa8.6□□□□□ -1.03
PHGDH-215ENST00000641371 KCNJ15Q99712 375 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms