RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 REEP3Q6NUK4 255 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 ZNF836Q6ZNA1 936 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 ZNF600Q6ZNG1 722 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 DNM1P46Q6ZS02 220 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 SLC25A48Q6ZT89 311 aaKnown RBP2.46□□□□□ -2.02
VPS8-228ENST00000628962 ACOT7LQ6ZUV0 252 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 COPS6Q7L5N1 327 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 SLC25A42Q86VD7 318 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 SLC26A11Q86WA9 606 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 HIPK1Q86Z02 1210 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 SKA3Q8IX90 412 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 Q8N377 158 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 MS4A15Q8N5U1 240 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 EID2Q8N6I1 236 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 C8orf31Q8N9H6 132 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 GATSQ8NAP1 163 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 OR13C9Q8NGT0 318 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 OR2A12Q8NGT7 310 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 NDNFQ8TB73 568 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 ZNF564Q8TBZ8 553 aaPredicted RBP2.46□□□□□ -2.02
VPS8-228ENST00000628962 ZNF596Q8TC21 504 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 CD300LFQ8TDQ1 290 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 SETD7Q8WTS6 366 aaKnown RBP2.46□□□□□ -2.02
VPS8-228ENST00000628962 ASB9Q96DX5 294 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 MS4A4EQ96PG1 132 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 OR8B4Q96RC9 309 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 KCNA7Q96RP8 456 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 KLHDC3Q9BQ90 382 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 TMEM59Q9BXS4 323 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 SRXN1Q9BYN0 137 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 RANBP3Q9H6Z4 567 aaPredicted RBP2.46□□□□□ -2.02
VPS8-228ENST00000628962 UGT1A10Q9HAW8 530 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 FOLH1BQ9HBA9 442 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.46□□□□□ -2.02
VPS8-228ENST00000628962 SAMSN1Q9NSI8 373 aaKnown RBP2.46□□□□□ -2.02
VPS8-228ENST00000628962 GPATCH2LQ9NWQ4 482 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 GIN1Q9NXP7 522 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 KCNIP1Q9NZI2 227 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 B4GALT7Q9UBV7 327 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 CLN8Q9UBY8 286 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 RSPH14Q9UHP6 348 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 LSM7Q9UK45 103 aaKnown RBP2.46□□□□□ -2.02
VPS8-228ENST00000628962 MMP17Q9ULZ9 603 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 STYXL1Q9Y6J8 313 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 NUP98P52948 1817 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 PSME4Q14997 1843 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 NBEAQ8NFP9 2946 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 TDRD15B5MCY1 1934 aaKnown RBP2.46□□□□□ -2.02
VPS8-228ENST00000628962 FRYQ5TBA9 3013 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 RIF1Q5UIP0 2472 aaKnown RBP2.46□□□□□ -2.02
VPS8-228ENST00000628962 WDR87Q6ZQQ6 2873 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 GVINP1Q7Z2Y8 2422 aa2.46□□□□□ -2.02
VPS8-228ENST00000628962 DDX60Q8IY21 1712 aaKnown RBP2.45□□□□□ -2.02
VPS8-228ENST00000628962 SMG1Q96Q15 3661 aaKnown RBP2.45□□□□□ -2.02
VPS8-228ENST00000628962 IGHV1OR21-1A0A087WYE8 117 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 E9PQ18 207 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 CCL21O00585 134 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 CHST1O43916 411 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 GALR3O60755 368 aaPredicted RBP2.45□□□□□ -2.02
VPS8-228ENST00000628962 CNMDO75829 334 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 VENTXO95231 258 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 FGF1P05230 155 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 OR8U8P0C7N1 319 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 UBCP0CG48 685 aaKnown RBP2.45□□□□□ -2.02
VPS8-228ENST00000628962 SPAM1P38567 509 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 KIR2DS2P43631 304 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 CX3CR1P49238 355 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 CCL23P55773 120 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 FBXW4P57775 412 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 ERVK-25P63136 954 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 CDH17Q12864 832 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 RUNX3Q13761 415 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 ANGPT1Q15389 498 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 USF2Q15853 346 aaPredicted RBP2.45□□□□□ -2.02
VPS8-228ENST00000628962 TCEAL5Q5H9L2 206 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 LY6G6FQ5SQ64 297 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 MARCH8Q5T0T0 291 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 MFSD14CQ5VZR4 134 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 STUMQ69YW2 141 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 TIGD3Q6B0B8 471 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 APOBEC3HQ6NTF7 200 aaKnown RBP2.45□□□□□ -2.02
VPS8-228ENST00000628962 C2orf66Q6UXQ4 117 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 ZNF571Q7Z3V5 609 aaPredicted RBP2.45□□□□□ -2.02
VPS8-228ENST00000628962 GPR65Q8IYL9 337 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 ST13P4Q8IZP2 240 aaPredicted RBP2.45□□□□□ -2.02
VPS8-228ENST00000628962 LIX1Q8N485 282 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 TMEM104Q8NE00 496 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 OR2G2Q8NGZ5 317 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 CLHC1Q8NHS4 586 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 SLC7A13Q8TCU3 470 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 CMTM7Q96FZ5 175 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 PGLYRP4Q96LB8 373 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 JSRP1Q96MG2 331 aaPredicted RBP2.45□□□□□ -2.02
VPS8-228ENST00000628962 OPALINQ96PE5 141 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 XPO6Q96QU8 1125 aaKnown RBP2.45□□□□□ -2.02
VPS8-228ENST00000628962 SORT1Q99523 831 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 PAIP2Q9BPZ3 127 aaKnown RBP2.45□□□□□ -2.02
VPS8-228ENST00000628962 NAT9Q9BTE0 207 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 GBA3Q9H227 469 aa2.45□□□□□ -2.02
VPS8-228ENST00000628962 MRPL47Q9HD33 250 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms