RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 BBS1Q8NFJ9 593 aa10.72□□□□□ -0.69
TGFB1-204ENST00000600196 ZNRF4Q8WWF5 429 aa10.72□□□□□ -0.69
TGFB1-204ENST00000600196 UBE2FQ969M7 185 aa10.72□□□□□ -0.69
TGFB1-204ENST00000600196 FBXO17Q96EF6 278 aa10.72□□□□□ -0.69
TGFB1-204ENST00000600196 ZNF75AQ96N20 296 aa10.72□□□□□ -0.69
TGFB1-204ENST00000600196 WFIKKN1Q96NZ8 548 aa10.72□□□□□ -0.69
TGFB1-204ENST00000600196 COQ7Q99807 217 aa10.72□□□□□ -0.69
TGFB1-204ENST00000600196 MED18Q9BUE0 208 aa10.72□□□□□ -0.69
TGFB1-204ENST00000600196 OR2H1Q9GZK4 316 aa10.72□□□□□ -0.69
TGFB1-204ENST00000600196 RNF121Q9H920 327 aa10.72□□□□□ -0.69
TGFB1-204ENST00000600196 SP140LQ9H930 580 aa10.72□□□□□ -0.69
TGFB1-204ENST00000600196 MED20Q9H944 212 aa10.72□□□□□ -0.69
TGFB1-204ENST00000600196 ADGRL4Q9HBW9 690 aa10.72□□□□□ -0.69
TGFB1-204ENST00000600196 DDX28Q9NUL7 540 aaKnown RBP10.72□□□□□ -0.69
TGFB1-204ENST00000600196 ZNF224Q9NZL3 707 aa10.72□□□□□ -0.69
TGFB1-204ENST00000600196 CACNA1CQ13936 2221 aa10.72□□□□□ -0.69
TGFB1-204ENST00000600196 USP9XQ93008 2570 aaPredicted RBP10.72□□□□□ -0.69
TGFB1-204ENST00000600196 A0A096LPE4 126 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 A0A1W2PPZ6 126 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 OR6C6A6NF89 314 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 SGCEO43556 437 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 CLIC3O95833 236 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 GYPBP06028 91 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 RGS6P49758 472 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 GRB2P62993 217 aaKnown RBP10.71□□□□□ -0.69
TGFB1-204ENST00000600196 PSG4Q00888 419 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 HIKESHIQ53FT3 197 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 BEX5Q5H9J7 111 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 ELFN2Q5R3F8 820 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 C9orf135Q5VTT2 229 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 ARL9Q6T311 187 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 ERI1Q8IV48 349 aaKnown RBP10.71□□□□□ -0.69
TGFB1-204ENST00000600196 ACBD7Q8N6N7 88 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 OR51L1Q8NGJ5 315 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 RNF133Q8WVZ7 376 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 MYDGFQ969H8 173 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 ZMYND19Q96E35 227 aaPredicted RBP10.71□□□□□ -0.69
TGFB1-204ENST00000600196 RNFT2Q96EX2 444 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 COG8Q96MW5 612 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 SH3GL3Q99963 347 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 HELZ2Q9BYK8 2649 aaKnown RBP10.71□□□□□ -0.69
TGFB1-204ENST00000600196 DUSP21Q9H596 190 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 ESRP2Q9H6T0 727 aaKnown RBP10.71□□□□□ -0.69
TGFB1-204ENST00000600196 FKBP14Q9NWM8 211 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 DNAJC27Q9NZQ0 273 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 ASH2LQ9UBL3 628 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 PSORS1C1Q9UIG5 152 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 GDF2Q9UK05 429 aaPredicted RBP10.71□□□□□ -0.69
TGFB1-204ENST00000600196 DIMT1Q9UNQ2 313 aaKnown RBP10.71□□□□□ -0.69
TGFB1-204ENST00000600196 POLR1DQ9Y2S0 133 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 LHFPL6Q9Y693 200 aa10.71□□□□□ -0.69
TGFB1-204ENST00000600196 FLNCQ14315 2725 aa10.71□□□□□ -0.7
TGFB1-204ENST00000600196 HCFC1P51610 2035 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 ZNF878C9JN71 531 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 ZNF670-ZNF695F2Z2N8 137 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 SYNGR3O43761 229 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 MPZL1O95297 269 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 IGHA1P01876 353 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 HLA-HP01893 362 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 SCG5P05408 212 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 LYNP07948 512 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 TACSTD2P09758 323 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 CD79AP11912 226 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 ZNF14P17017 642 aaPredicted RBP10.7□□□□□ -0.7
TGFB1-204ENST00000600196 ZNF32P17041 273 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 ZNF91Q05481 1191 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 KRTAP27-1Q3LI81 207 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 PABPC1L2AQ5JQF8 200 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 PLEKHG7Q6ZR37 379 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 DPY19L4Q7Z388 723 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 SLC35F2Q8IXU6 374 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 SYS1Q8N2H4 156 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 LRRC18Q8N456 261 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 OR4F15Q8NGB8 312 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 OR6N2Q8NGY6 317 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 ST7LQ8TDW4 575 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 PSMG3-AS1Q96PY0 264 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 EMC7Q9NPA0 242 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 CHCHD3Q9NX63 227 aaKnown RBP10.7□□□□□ -0.7
TGFB1-204ENST00000600196 LAMP5Q9UJQ1 280 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 LRCH1Q9Y2L9 728 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 EXOSC1Q9Y3B2 195 aaKnown RBP10.7□□□□□ -0.7
TGFB1-204ENST00000600196 SPEF1Q9Y4P9 236 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 PCDHGB5Q9Y5G0 923 aa10.7□□□□□ -0.7
TGFB1-204ENST00000600196 ANKHD1Q8IWZ3 2542 aaKnown RBP10.7□□□□□ -0.7
TGFB1-204ENST00000600196 FAM221AA4D161 298 aa10.69□□□□□ -0.7
TGFB1-204ENST00000600196 TVP23AA6NH52 213 aa10.69□□□□□ -0.7
TGFB1-204ENST00000600196 FAM171A2A8MVW0 826 aa10.69□□□□□ -0.7
TGFB1-204ENST00000600196 VSTM5A8MXK1 200 aa10.69□□□□□ -0.7
TGFB1-204ENST00000600196 PRSS44E7EML9 344 aa10.69□□□□□ -0.7
TGFB1-204ENST00000600196 CRYAAP02489 173 aa10.69□□□□□ -0.7
TGFB1-204ENST00000600196 THBDP07204 575 aa10.69□□□□□ -0.7
TGFB1-204ENST00000600196 SPARCP09486 303 aa10.69□□□□□ -0.7
TGFB1-204ENST00000600196 OTX1P32242 354 aaPredicted RBP10.69□□□□□ -0.7
TGFB1-204ENST00000600196 APLNRP35414 380 aa10.69□□□□□ -0.7
TGFB1-204ENST00000600196 GABARAPL2P60520 117 aa10.69□□□□□ -0.7
TGFB1-204ENST00000600196 ACTA2P62736 377 aa10.69□□□□□ -0.7
TGFB1-204ENST00000600196 ACTG2P63267 376 aa10.69□□□□□ -0.7
TGFB1-204ENST00000600196 TBC1D28Q2M2D7 210 aa10.69□□□□□ -0.7
TGFB1-204ENST00000600196 CCDC92Q53HC0 331 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms