RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 MEPEQ9NQ76 525 aaPredicted RBP4.5□□□□□ -1.69
BRIP1-202ENST00000577598 RMND1Q9NWS8 449 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 CNTNAP2Q9UHC6 1331 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 A0A087WZ39 114 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 UGT2B11O75310 529 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 SLC2A2P11168 524 aaPredicted RBP4.5□□□□□ -1.69
BRIP1-202ENST00000577598 INSM1Q01101 510 aaPredicted RBP4.5□□□□□ -1.69
BRIP1-202ENST00000577598 MAPK14Q16539 360 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 PRTGQ2VWP7 1150 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 HLA-BQ31612 363 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 SPANXN4Q5MJ08 99 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 TCEAL6Q6IPX3 200 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 GPRIN3Q6ZVF9 776 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 RNF133Q8WVZ7 376 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 TMEM175Q9BSA9 504 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 DDX31Q9H8H2 851 aaKnown RBP4.5□□□□□ -1.69
BRIP1-202ENST00000577598 TFR2Q9UP52 801 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 KLF13Q9Y2Y9 288 aaPredicted RBP4.5□□□□□ -1.69
BRIP1-202ENST00000577598 MMACHCQ9Y4U1 282 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 ATP6AP2A0A1C7CYW4 349 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 OR10A3P58181 314 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 ASAH1Q13510 395 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 GUSBP1Q15486 140 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 DGUOKQ16854 277 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 LYRM7Q5U5X0 104 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 FAM199XQ6PEV8 388 aaPredicted RBP4.5□□□□□ -1.69
BRIP1-202ENST00000577598 TMED4Q7Z7H5 227 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 CALHM1Q8IU99 346 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 LRRC56Q8IYG6 542 aaPredicted RBP4.5□□□□□ -1.69
BRIP1-202ENST00000577598 NANOGP1Q8N7R0 232 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 MCOLN3Q8TDD5 553 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 BADQ92934 168 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 QKIQ96PU8 341 aaKnown RBP eCLIP4.5□□□□□ -1.695e-7■■■■■ 39.3
BRIP1-202ENST00000577598 SMIM3Q9BZL3 60 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 CXorf21Q9HAI6 301 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 ACOT13Q9NPJ3 140 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 UBQLN1Q9UMX0 589 aaKnown RBP4.5□□□□□ -1.69
BRIP1-202ENST00000577598 CITO14578 2027 aa4.5□□□□□ -1.69
BRIP1-202ENST00000577598 MN1Q10571 1320 aaPredicted RBP4.49□□□□□ -1.69
BRIP1-202ENST00000577598 SMIM28A0A1B0GU29 152 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 OTOL1A6NHN0 477 aaPredicted RBP4.49□□□□□ -1.69
BRIP1-202ENST00000577598 TNFSF13O75888 250 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 NDUFA7O95182 113 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 UCHL3P15374 230 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 GDF1P27539 372 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 RND2P52198 227 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 GNG5P63218 68 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 C4orf26Q17RF5 130 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 TPTE2P1Q5T6R2 138 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 PWWP2BQ6NUJ5 590 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 BHLHA15Q7RTS1 189 aaPredicted RBP4.49□□□□□ -1.69
BRIP1-202ENST00000577598 METTL13Q8N6R0 699 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 OR14A16Q8NHC5 309 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 UBA3Q8TBC4 463 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 RITA1Q96K30 269 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 COL21A1Q96P44 957 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 ZNF300Q96RE9 604 aaPredicted RBP4.49□□□□□ -1.69
BRIP1-202ENST00000577598 C20orf144Q9BQM9 153 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 SNX10Q9Y5X0 201 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 NEDD4P46934 1319 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 HPGDSO60760 199 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 C6orf47O95873 294 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 HOXB4P17483 251 aaPredicted RBP4.49□□□□□ -1.69
BRIP1-202ENST00000577598 CXCL3P19876 107 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 MARK3P27448 753 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 GRB7Q14451 532 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 PGGHGQ32M88 737 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 C1orf195Q5TG92 126 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 SYCE2Q6PIF2 218 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 SMARCD3Q6STE5 483 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 ANKRD33Q7Z3H0 272 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 MYPOPQ86VE0 399 aaPredicted RBP4.49□□□□□ -1.69
BRIP1-202ENST00000577598 OR4M1Q8NGD0 313 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 OR6K2Q8NGY2 324 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 CYGBQ8WWM9 190 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 NPAS1Q99742 590 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 RSPO3Q9BXY4 272 aaPredicted RBP4.49□□□□□ -1.69
BRIP1-202ENST00000577598 ENKD1Q9H0I2 346 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 GLIPR2Q9H4G4 154 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 PURGQ9UJV8 347 aaKnown RBP4.49□□□□□ -1.69
BRIP1-202ENST00000577598 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.49□□□□□ -1.69
BRIP1-202ENST00000577598 SNX11Q9Y5W9 270 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 PIKFYVEQ9Y2I7 2098 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 ACOT8O14734 319 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 DUS4LO95620 317 aaKnown RBP4.49□□□□□ -1.69
BRIP1-202ENST00000577598 HBE1P02100 147 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 CT45A8P0DMV1 189 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 CT45A9P0DMV2 189 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 CYP3A5P20815 502 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 NR4A1P22736 598 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 SOX3P41225 446 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 HCCSP53701 268 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 CCL23P55773 120 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 ARL16Q0P5N6 197 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 TFDP2Q14188 446 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 MTF1Q14872 753 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 ALX1Q15699 326 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 C2CD6Q53TS8 623 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 CT45A2Q5DJT8 189 aa4.49□□□□□ -1.69
BRIP1-202ENST00000577598 MDS2Q8NDY4 140 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms