RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 ANKFN1Q8N957 763 aa0.4□□□□□ -2.35
FOXN3-216ENST00000557496 OR5T1Q8NG75 326 aa0.4□□□□□ -2.35
FOXN3-216ENST00000557496 CSPG4P5Q96PW8 444 aa0.4□□□□□ -2.35
FOXN3-216ENST00000557496 SLC38A2Q96QD8 506 aa0.4□□□□□ -2.35
FOXN3-216ENST00000557496 MTMR9Q96QG7 549 aa0.4□□□□□ -2.35
FOXN3-216ENST00000557496 NIPAL2Q9H841 368 aa0.4□□□□□ -2.35
FOXN3-216ENST00000557496 TMEM106BQ9NUM4 274 aa0.4□□□□□ -2.35
FOXN3-216ENST00000557496 SMOXQ9NWM0 555 aa0.4□□□□□ -2.35
FOXN3-216ENST00000557496 ATP6V0A2Q9Y487 856 aa0.4□□□□□ -2.35
FOXN3-216ENST00000557496 TRAV19A0A0A6YYK7 116 aa0.39□□□□□ -2.35
FOXN3-216ENST00000557496 OR6C74A6NCV1 312 aa0.39□□□□□ -2.35
FOXN3-216ENST00000557496 GPR89AB7ZAQ6 455 aa0.39□□□□□ -2.35
FOXN3-216ENST00000557496 GPR89BP0CG08 455 aa0.39□□□□□ -2.35
FOXN3-216ENST00000557496 CEACAM3P40198 252 aa0.39□□□□□ -2.35
FOXN3-216ENST00000557496 VHLP40337 213 aa0.39□□□□□ -2.35
FOXN3-216ENST00000557496 FBXW4P57775 412 aa0.39□□□□□ -2.35
FOXN3-216ENST00000557496 TTC23Q5W5X9 447 aa0.39□□□□□ -2.35
FOXN3-216ENST00000557496 AMMECR1LQ6DCA0 310 aa0.39□□□□□ -2.35
FOXN3-216ENST00000557496 MGARPQ8TDB4 240 aa0.39□□□□□ -2.35
FOXN3-216ENST00000557496 GGTLC1Q9BX51 225 aa0.39□□□□□ -2.35
FOXN3-216ENST00000557496 ASF1BQ9NVP2 202 aa0.39□□□□□ -2.35
FOXN3-216ENST00000557496 AURKCQ9UQB9 309 aa0.39□□□□□ -2.35
FOXN3-216ENST00000557496 CAMTA1Q9Y6Y1 1673 aa0.39□□□□□ -2.35
FOXN3-216ENST00000557496 NOTCH1P46531 2555 aa0.38□□□□□ -2.35
FOXN3-216ENST00000557496 THADAQ6YHU6 1953 aa0.38□□□□□ -2.35
FOXN3-216ENST00000557496 OR5H1A6NKK0 313 aa0.38□□□□□ -2.35
FOXN3-216ENST00000557496 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.38□□□□□ -2.35
FOXN3-216ENST00000557496 ERLIN2O94905 339 aa0.38□□□□□ -2.35
FOXN3-216ENST00000557496 FSTL3O95633 263 aa0.38□□□□□ -2.35
FOXN3-216ENST00000557496 AK1P00568 194 aa0.38□□□□□ -2.35
FOXN3-216ENST00000557496 CTSLP07711 333 aa0.38□□□□□ -2.35
FOXN3-216ENST00000557496 ACSM4P0C7M7 580 aa0.38□□□□□ -2.35
FOXN3-216ENST00000557496 OR5H8P0DN80 308 aa0.38□□□□□ -2.35
FOXN3-216ENST00000557496 CBR1P16152 277 aa0.38□□□□□ -2.35
FOXN3-216ENST00000557496 ARFIP1P53367 373 aa0.38□□□□□ -2.35
FOXN3-216ENST00000557496 MXD1Q05195 221 aa0.38□□□□□ -2.35
FOXN3-216ENST00000557496 PPIL2Q13356 520 aa0.38□□□□□ -2.35
FOXN3-216ENST00000557496 ZNF181Q2M3W8 571 aa0.38□□□□□ -2.35
FOXN3-216ENST00000557496 YIF1BQ5BJH7 314 aa0.38□□□□□ -2.35
FOXN3-216ENST00000557496 LIX1Q8N485 282 aa0.38□□□□□ -2.35
FOXN3-216ENST00000557496 PARD6BQ9BYG5 372 aa0.38□□□□□ -2.35
FOXN3-216ENST00000557496 PPA2Q9H2U2 334 aa0.38□□□□□ -2.35
FOXN3-216ENST00000557496 RNF14Q9UBS8 474 aa0.38□□□□□ -2.35
FOXN3-216ENST00000557496 CHRNA9Q9UGM1 479 aa0.38□□□□□ -2.35
FOXN3-216ENST00000557496 NOL7Q9UMY1 257 aaKnown RBP0.38□□□□□ -2.35
FOXN3-216ENST00000557496 ST3GAL6Q9Y274 331 aa0.38□□□□□ -2.35
FOXN3-216ENST00000557496 MBLAC1A4D2B0 266 aaPredicted RBP0.37□□□□□ -2.35
FOXN3-216ENST00000557496 METTL21EPA6NDL7 271 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 KRBOX1C9JBD0 128 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 PRAMEF26H0Y7S4 382 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 AQP9O43315 295 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 EIF1BO60739 113 aaKnown RBP0.37□□□□□ -2.35
FOXN3-216ENST00000557496 SCELO95171 688 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 C1orf105O95561 183 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 PAHP00439 452 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 CHI3L1P36222 383 aaPredicted RBP0.37□□□□□ -2.35
FOXN3-216ENST00000557496 EIF1P41567 113 aaKnown RBP0.37□□□□□ -2.35
FOXN3-216ENST00000557496 HCAR3P49019 387 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 CDKN2DP55273 166 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 PRMT2P55345 433 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 GFERP55789 205 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 BIKQ13323 160 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 RCAN2Q14206 197 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 SLC9A3R2Q15599 337 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 USH1GQ495M9 461 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 KLHL12Q53G59 568 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 TCEAL5Q5H9L2 206 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 SOHLH1Q5JUK2 328 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 CPTPQ5TA50 214 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 OR4F3Q6IEY1 312 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 APOBEC3HQ6NTF7 200 aaKnown RBP0.37□□□□□ -2.35
FOXN3-216ENST00000557496 H3F3CQ6NXT2 135 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 EGFL6Q8IUX8 553 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 STK40Q8N2I9 435 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 OR11H7Q8NGC8 314 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 TCEAL3Q969E4 200 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 CNDP1Q96KN2 507 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 KRT23Q9C075 422 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 CSNK1G1Q9HCP0 422 aa0.37□□□□□ -2.35
FOXN3-216ENST00000557496 KRT87PA6NCN2 255 aa0.36□□□□□ -2.35
FOXN3-216ENST00000557496 PLIN3O60664 434 aa0.36□□□□□ -2.35
FOXN3-216ENST00000557496 DPM1O60762 260 aa0.36□□□□□ -2.35
FOXN3-216ENST00000557496 CCDC22O60826 627 aa0.36□□□□□ -2.35
FOXN3-216ENST00000557496 SCGNO76038 276 aa0.36□□□□□ -2.35
FOXN3-216ENST00000557496 GLSO94925 669 aaPredicted RBP0.36□□□□□ -2.35
FOXN3-216ENST00000557496 RAB3AP20336 220 aa0.36□□□□□ -2.35
FOXN3-216ENST00000557496 CSRP1P21291 193 aaKnown RBP0.36□□□□□ -2.35
FOXN3-216ENST00000557496 F2RP25116 425 aa0.36□□□□□ -2.35
FOXN3-216ENST00000557496 ZNF83P51522 516 aa0.36□□□□□ -2.35
FOXN3-216ENST00000557496 SYNJ2BPP57105 145 aa0.36□□□□□ -2.35
FOXN3-216ENST00000557496 KRTAP10-4P60372 401 aaPredicted RBP0.36□□□□□ -2.35
FOXN3-216ENST00000557496 CBX1P83916 185 aa0.36□□□□□ -2.35
FOXN3-216ENST00000557496 MRPL28Q13084 256 aaKnown RBP0.36□□□□□ -2.35
FOXN3-216ENST00000557496 CCDC184Q52MB2 194 aa0.36□□□□□ -2.35
FOXN3-216ENST00000557496 TTC19Q6DKK2 380 aaPredicted RBP0.36□□□□□ -2.35
FOXN3-216ENST00000557496 ZNF470Q6ECI4 717 aa0.36□□□□□ -2.35
FOXN3-216ENST00000557496 DEGS2Q6QHC5 323 aa0.36□□□□□ -2.35
FOXN3-216ENST00000557496 SLC25A48Q6ZT89 311 aaKnown RBP0.36□□□□□ -2.35
FOXN3-216ENST00000557496 DHDDSQ86SQ9 333 aa0.36□□□□□ -2.35
FOXN3-216ENST00000557496 MUC7Q8TAX7 377 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms