RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 GLYATQ6IB77 296 aa13.79□□□□□ -0.2
DDX55-212ENST00000544738 USP43Q70EL4 1123 aa13.79□□□□□ -0.2
DDX55-212ENST00000544738 NARFLQ9H6Q4 476 aa13.79□□□□□ -0.2
DDX55-212ENST00000544738 KRCC1Q9NPI7 259 aaPredicted RBP13.79□□□□□ -0.2
DDX55-212ENST00000544738 CGGBP1Q9UFW8 167 aaPredicted RBP13.79□□□□□ -0.2
DDX55-212ENST00000544738 NDRG4Q9ULP0 352 aaKnown RBP13.79□□□□□ -0.2
DDX55-212ENST00000544738 ADAM18Q9Y3Q7 739 aa13.79□□□□□ -0.2
DDX55-212ENST00000544738 PRSS37A4D1T9 235 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 CDC14BO60729 498 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 NDUFB2O95178 105 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 MSMBP08118 114 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 COX5BP10606 129 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 TUBG1P23258 451 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 PPP1CBP62140 327 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 ENDOGQ14249 297 aaKnown RBP13.78□□□□□ -0.2
DDX55-212ENST00000544738 KRT72Q14CN4 511 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 HFEQ30201 348 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 GPR139Q6DWJ6 353 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 ZNF774Q6NX45 483 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 FAHD2BQ6P2I3 314 aaPredicted RBP13.78□□□□□ -0.2
DDX55-212ENST00000544738 TSEN54Q7Z6J9 526 aaKnown RBP13.78□□□□□ -0.2
DDX55-212ENST00000544738 ZER1Q7Z7L7 766 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 ABHD4Q8TB40 342 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 SLC25A40Q8TBP6 338 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 KLF14Q8TD94 323 aaPredicted RBP13.78□□□□□ -0.2
DDX55-212ENST00000544738 TMEM186Q96B77 213 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 FAHD2AQ96GK7 314 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 C4orf45Q96LM5 186 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 Q96M85 177 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 ZNF570Q96NI8 536 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 OR2J1Q9GZK6 312 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 SAP30LQ9HAJ7 183 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 POLE4Q9NR33 117 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 TUBG2Q9NRH3 451 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 DCAF13Q9NV06 445 aaKnown RBP13.78□□□□□ -0.2
DDX55-212ENST00000544738 TREM2Q9NZC2 230 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 ADA2Q9NZK5 511 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 NDUFAF4Q9P032 175 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 EGFL7Q9UHF1 273 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 GRIP1Q9Y3R0 1128 aa13.78□□□□□ -0.2
DDX55-212ENST00000544738 H7C1C5 153 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 PTP4A3O75365 173 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 ADH4P08319 380 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 GAAP10253 952 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 EPHA1P21709 976 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 SDHAP31040 664 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 MPV17P39210 176 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 MMP15P51511 669 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 LMO4P61968 165 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 LCN6P62502 163 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 GLO1Q04760 184 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 SCRN3Q0VDG4 424 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 ZMAT1Q5H9K5 638 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 FGD3Q5JSP0 725 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 SPATA46Q5T0L3 261 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 USP51Q70EK9 711 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 FAM122BQ7Z309 247 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 IPCEF1Q8WWN9 437 aaPredicted RBP13.77□□□□□ -0.21
DDX55-212ENST00000544738 ELMOD3Q96FG2 381 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 TIMD4Q96H15 378 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 FAM46AQ96IP4 442 aaKnown RBP13.77□□□□□ -0.21
DDX55-212ENST00000544738 C7orf34Q96L11 122 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 DIRC2Q96SL1 478 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 EGLN1Q9GZT9 426 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 NSRP1Q9H0G5 558 aaKnown RBP13.77□□□□□ -0.21
DDX55-212ENST00000544738 NRIP3Q9NQ35 241 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 ZDHHC8Q9ULC8 765 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 AURKCQ9UQB9 309 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 SIGLEC7Q9Y286 467 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 ZNF281Q9Y2X9 895 aa13.77□□□□□ -0.21
DDX55-212ENST00000544738 TEX13CA0A0J9YWL9 993 aa13.76□□□□□ -0.21
DDX55-212ENST00000544738 CLDN25C9JDP6 229 aa13.76□□□□□ -0.21
DDX55-212ENST00000544738 NGFP01138 241 aa13.76□□□□□ -0.21
DDX55-212ENST00000544738 IGHV1-46P01743 117 aa13.76□□□□□ -0.21
DDX55-212ENST00000544738 ZNF26P17031 533 aaPredicted RBP13.76□□□□□ -0.21
DDX55-212ENST00000544738 SMIM11AP58511 58 aa13.76□□□□□ -0.21
DDX55-212ENST00000544738 TSTQ16762 297 aaKnown RBP13.76□□□□□ -0.21
DDX55-212ENST00000544738 MESTQ5EB52 335 aa13.76□□□□□ -0.21
DDX55-212ENST00000544738 RFPL4BQ6ZWI9 263 aa13.76□□□□□ -0.21
DDX55-212ENST00000544738 CPLX4Q7Z7G2 160 aa13.76□□□□□ -0.21
DDX55-212ENST00000544738 ADCK1Q86TW2 530 aa13.76□□□□□ -0.21
DDX55-212ENST00000544738 NPEPL1Q8NDH3 523 aa13.76□□□□□ -0.21
DDX55-212ENST00000544738 OR51F2Q8NH61 342 aa13.76□□□□□ -0.21
DDX55-212ENST00000544738 RAB1CQ92928 201 aa13.76□□□□□ -0.21
DDX55-212ENST00000544738 RAB39BQ96DA2 213 aa13.76□□□□□ -0.21
DDX55-212ENST00000544738 LRRC37BQ96QE4 947 aa13.76□□□□□ -0.21
DDX55-212ENST00000544738 GPX7Q96SL4 187 aaPredicted RBP13.76□□□□□ -0.21
DDX55-212ENST00000544738 FAM107BQ9H098 131 aa13.76□□□□□ -0.21
DDX55-212ENST00000544738 GORASP2Q9H8Y8 452 aa13.76□□□□□ -0.21
DDX55-212ENST00000544738 TBCCD1Q9NVR7 557 aa13.76□□□□□ -0.21
DDX55-212ENST00000544738 TRAV20A0A0B4J274 112 aa13.75□□□□□ -0.21
DDX55-212ENST00000544738 WNT9BO14905 357 aa13.75□□□□□ -0.21
DDX55-212ENST00000544738 SGCEO43556 437 aa13.75□□□□□ -0.21
DDX55-212ENST00000544738 SPRY3O43610 288 aa13.75□□□□□ -0.21
DDX55-212ENST00000544738 SNX3O60493 162 aa13.75□□□□□ -0.21
DDX55-212ENST00000544738 KHDRBS3O75525 346 aaKnown RBP13.75□□□□□ -0.21
DDX55-212ENST00000544738 ABHD16AO95870 558 aa13.75□□□□□ -0.21
DDX55-212ENST00000544738 SCG5P05408 212 aa13.75□□□□□ -0.21
DDX55-212ENST00000544738 GSTM3P21266 225 aa13.75□□□□□ -0.21
DDX55-212ENST00000544738 OMPP47874 163 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms