RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 CPEB3Q8NE35 698 aaKnown RBP16.82■□□□□ 0.28
DDX55-207ENST00000540763 GJC3Q8NFK1 279 aa16.82■□□□□ 0.28
DDX55-207ENST00000540763 POM121L2Q96KW2 1035 aa16.82■□□□□ 0.28
DDX55-207ENST00000540763 SLC29A1Q99808 456 aa16.82■□□□□ 0.28
DDX55-207ENST00000540763 DHRS9Q9BPW9 319 aa16.82■□□□□ 0.28
DDX55-207ENST00000540763 HDHD2Q9H0R4 259 aa16.82■□□□□ 0.28
DDX55-207ENST00000540763 ZNF442Q9H7R0 627 aa16.82■□□□□ 0.28
DDX55-207ENST00000540763 CYB5R1Q9UHQ9 305 aa16.82■□□□□ 0.28
DDX55-207ENST00000540763 SPEF1Q9Y4P9 236 aa16.82■□□□□ 0.28
DDX55-207ENST00000540763 FAM171A2A8MVW0 826 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 E7EQL1 145 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 DOK2O60496 412 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 ICMTO60725 284 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 SLC2A5P22732 501 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 STOMP27105 288 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 APEX1P27695 318 aaKnown RBP16.81■□□□□ 0.28
DDX55-207ENST00000540763 PCSK6P29122 969 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 POLR2IP36954 125 aaKnown RBP16.81■□□□□ 0.28
DDX55-207ENST00000540763 ENTPD1P49961 510 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 ADAM8P78325 824 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 NKX6-1P78426 367 aaPredicted RBP16.81■□□□□ 0.28
DDX55-207ENST00000540763 RAB35Q15286 201 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 TRIP10Q15642 601 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 MEP1BQ16820 701 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 SLC18B1Q6NT16 456 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 B3GLCTQ6Y288 498 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 VASH1Q7L8A9 365 aaPredicted RBP16.81■□□□□ 0.28
DDX55-207ENST00000540763 CDH24Q86UP0 819 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 OR6K6Q8NGW6 343 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 OR2AJ1Q8NGZ0 328 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 AKR7LQ8NHP1 331 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 TMEM163Q8TC26 289 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 ZNRF4Q8WWF5 429 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 IPCEF1Q8WWN9 437 aaPredicted RBP16.81■□□□□ 0.28
DDX55-207ENST00000540763 NEUROG1Q92886 237 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 CDADC1Q9BWV3 514 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 MED20Q9H944 212 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 CDH20Q9HBT6 801 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 PLEK2Q9NYT0 353 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 ATP23Q9Y6H3 246 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 ROS1P08922 2347 aa16.81■□□□□ 0.28
DDX55-207ENST00000540763 PRKYO43930 277 aa16.8■□□□□ 0.28
DDX55-207ENST00000540763 ATE1O95260 518 aa16.8■□□□□ 0.28
DDX55-207ENST00000540763 DANCRP0C864 163 aa16.8■□□□□ 0.28
DDX55-207ENST00000540763 NR4A1P22736 598 aa16.8■□□□□ 0.28
DDX55-207ENST00000540763 GDI2P50395 445 aaKnown RBP16.8■□□□□ 0.28
DDX55-207ENST00000540763 CDC42P60953 191 aa16.8■□□□□ 0.28
DDX55-207ENST00000540763 RPS23P62266 143 aaKnown RBP16.8■□□□□ 0.28
DDX55-207ENST00000540763 GALK2Q01415 458 aa16.8■□□□□ 0.28
DDX55-207ENST00000540763 HGFACQ04756 655 aa16.8■□□□□ 0.28
DDX55-207ENST00000540763 NXNL2Q5VZ03 156 aa16.8■□□□□ 0.28
DDX55-207ENST00000540763 ZNF774Q6NX45 483 aa16.8■□□□□ 0.28
DDX55-207ENST00000540763 DTX2Q86UW9 622 aa16.8■□□□□ 0.28
DDX55-207ENST00000540763 C1orf174Q8IYL3 243 aa16.8■□□□□ 0.28
DDX55-207ENST00000540763 OR51L1Q8NGJ5 315 aa16.8■□□□□ 0.28
DDX55-207ENST00000540763 OR8J1Q8NGP2 316 aa16.8■□□□□ 0.28
DDX55-207ENST00000540763 IGFBPL1Q8WX77 278 aa16.8■□□□□ 0.28
DDX55-207ENST00000540763 PIGTQ969N2 578 aa16.8■□□□□ 0.28
DDX55-207ENST00000540763 OTULINQ96BN8 352 aa16.8■□□□□ 0.28
DDX55-207ENST00000540763 MBD6Q96DN6 1003 aa16.8■□□□□ 0.28
DDX55-207ENST00000540763 PITX2Q99697 317 aa16.8■□□□□ 0.28
DDX55-207ENST00000540763 OR51V1Q9H2C8 321 aa16.8■□□□□ 0.28
DDX55-207ENST00000540763 TOR3AQ9H497 397 aa16.8■□□□□ 0.28
DDX55-207ENST00000540763 CA10Q9NS85 328 aa16.8■□□□□ 0.28
DDX55-207ENST00000540763 OR6C6A6NF89 314 aa16.79■□□□□ 0.28
DDX55-207ENST00000540763 SYNGR3O43761 229 aa16.79■□□□□ 0.28
DDX55-207ENST00000540763 CD53P19397 219 aa16.79■□□□□ 0.28
DDX55-207ENST00000540763 DNASE1P24855 282 aa16.79■□□□□ 0.28
DDX55-207ENST00000540763 GSTT1P30711 240 aa16.79■□□□□ 0.28
DDX55-207ENST00000540763 APOBEC3AP31941 199 aaPredicted RBP16.79■□□□□ 0.28
DDX55-207ENST00000540763 DBPQ10586 325 aaPredicted RBP16.79■□□□□ 0.28
DDX55-207ENST00000540763 KEAP1Q14145 624 aa16.79■□□□□ 0.28
DDX55-207ENST00000540763 CCDC92Q53HC0 331 aaPredicted RBP16.79■□□□□ 0.28
DDX55-207ENST00000540763 OGFRL1Q5TC84 451 aaPredicted RBP16.79■□□□□ 0.28
DDX55-207ENST00000540763 LCN1P1Q5VSP4 162 aa16.79■□□□□ 0.28
DDX55-207ENST00000540763 UNQ6126/PRO20091Q6UXV3 157 aa16.79■□□□□ 0.28
DDX55-207ENST00000540763 GID4Q8IVV7 300 aa16.79■□□□□ 0.28
DDX55-207ENST00000540763 TCEANCQ8N8B7 351 aa16.79■□□□□ 0.28
DDX55-207ENST00000540763 ZNF511Q8NB15 262 aa16.79■□□□□ 0.28
DDX55-207ENST00000540763 SMAP2Q8WU79 429 aaPredicted RBP16.79■□□□□ 0.28
DDX55-207ENST00000540763 TRUB1Q8WWH5 349 aaKnown RBP16.79■□□□□ 0.28
DDX55-207ENST00000540763 NRGNQ92686 78 aa16.79■□□□□ 0.28
DDX55-207ENST00000540763 INTS14Q96SY0 518 aa16.79■□□□□ 0.28
DDX55-207ENST00000540763 MBOAT4Q96T53 435 aa16.79■□□□□ 0.28
DDX55-207ENST00000540763 COQ7Q99807 217 aa16.79■□□□□ 0.28
DDX55-207ENST00000540763 LIME1Q9H400 295 aa16.79■□□□□ 0.28
DDX55-207ENST00000540763 RNPEPL1Q9HAU8 725 aa16.79■□□□□ 0.28
DDX55-207ENST00000540763 SMPD3Q9NY59 655 aaPredicted RBP16.79■□□□□ 0.28
DDX55-207ENST00000540763 GDF2Q9UK05 429 aaPredicted RBP16.79■□□□□ 0.28
DDX55-207ENST00000540763 LOC100509620A0A075B734 347 aa16.78■□□□□ 0.28
DDX55-207ENST00000540763 TVP23AA6NH52 213 aa16.78■□□□□ 0.28
DDX55-207ENST00000540763 VSTM5A8MXK1 200 aa16.78■□□□□ 0.28
DDX55-207ENST00000540763 H0YHG0 523 aa16.78■□□□□ 0.28
DDX55-207ENST00000540763 RER1O15258 196 aa16.78■□□□□ 0.28
DDX55-207ENST00000540763 TLX2O43763 284 aaPredicted RBP16.78■□□□□ 0.28
DDX55-207ENST00000540763 PEX2P28328 305 aa16.78■□□□□ 0.28
DDX55-207ENST00000540763 TTKP33981 857 aa16.78■□□□□ 0.28
DDX55-207ENST00000540763 GLRXP35754 106 aa16.78■□□□□ 0.28
DDX55-207ENST00000540763 HTR5AP47898 357 aa16.78■□□□□ 0.28
DDX55-207ENST00000540763 ECH1Q13011 328 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms