RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 J3KTA2 159 aa16.64■□□□□ 0.25
TNFRSF1B-204ENST00000536782 SLC22A2O15244 555 aa16.64■□□□□ 0.25
TNFRSF1B-204ENST00000536782 ABHD16AO95870 558 aa16.64■□□□□ 0.25
TNFRSF1B-204ENST00000536782 COX5BP10606 129 aa16.64■□□□□ 0.25
TNFRSF1B-204ENST00000536782 TUBG1P23258 451 aa16.64■□□□□ 0.25
TNFRSF1B-204ENST00000536782 LCN6P62502 163 aa16.64■□□□□ 0.25
TNFRSF1B-204ENST00000536782 PSG7Q13046 419 aa16.64■□□□□ 0.25
TNFRSF1B-204ENST00000536782 SPRNQ5BIV9 151 aa16.64■□□□□ 0.25
TNFRSF1B-204ENST00000536782 VTCN1Q7Z7D3 282 aa16.64■□□□□ 0.25
TNFRSF1B-204ENST00000536782 NPEPL1Q8NDH3 523 aa16.64■□□□□ 0.25
TNFRSF1B-204ENST00000536782 OR13C2Q8NGS9 318 aa16.64■□□□□ 0.25
TNFRSF1B-204ENST00000536782 ZMYND19Q96E35 227 aaPredicted RBP16.64■□□□□ 0.25
TNFRSF1B-204ENST00000536782 EMC7Q9NPA0 242 aa16.64■□□□□ 0.25
TNFRSF1B-204ENST00000536782 TUBG2Q9NRH3 451 aa16.64■□□□□ 0.25
TNFRSF1B-204ENST00000536782 TBCCD1Q9NVR7 557 aa16.64■□□□□ 0.25
TNFRSF1B-204ENST00000536782 GRHPRQ9UBQ7 328 aa16.64■□□□□ 0.25
TNFRSF1B-204ENST00000536782 OPN4Q9UHM6 478 aa16.64■□□□□ 0.25
TNFRSF1B-204ENST00000536782 AP3M1Q9Y2T2 418 aa16.64■□□□□ 0.25
TNFRSF1B-204ENST00000536782 PPIAL4EA0A075B759 164 aa16.63■□□□□ 0.25
TNFRSF1B-204ENST00000536782 PPIAL4CA0A0B4J2A2 164 aa16.63■□□□□ 0.25
TNFRSF1B-204ENST00000536782 PPIAL4DF5H284 164 aa16.63■□□□□ 0.25
TNFRSF1B-204ENST00000536782 FFAR1O14842 300 aa16.63■□□□□ 0.25
TNFRSF1B-204ENST00000536782 FOXH1O75593 365 aa16.63■□□□□ 0.25
TNFRSF1B-204ENST00000536782 SCG5P05408 212 aa16.63■□□□□ 0.25
TNFRSF1B-204ENST00000536782 PPIAL4FP0DN26 164 aa16.63■□□□□ 0.25
TNFRSF1B-204ENST00000536782 TNFSF4P23510 183 aa16.63■□□□□ 0.25
TNFRSF1B-204ENST00000536782 FPR2P25090 351 aa16.63■□□□□ 0.25
TNFRSF1B-204ENST00000536782 RPL4P36578 427 aaKnown RBP16.63■□□□□ 0.25
TNFRSF1B-204ENST00000536782 SCRN3Q0VDG4 424 aa16.63■□□□□ 0.25
TNFRSF1B-204ENST00000536782 CDK5R2Q13319 367 aa16.63■□□□□ 0.25
TNFRSF1B-204ENST00000536782 ZNF730Q6ZMV8 503 aa16.63■□□□□ 0.25
TNFRSF1B-204ENST00000536782 ACOT11Q8WXI4 607 aaPredicted RBP16.63■□□□□ 0.25
TNFRSF1B-204ENST00000536782 DCLRE1CQ96SD1 692 aaKnown RBP16.63■□□□□ 0.25
TNFRSF1B-204ENST00000536782 TMEM106BQ9NUM4 274 aa16.63■□□□□ 0.25
TNFRSF1B-204ENST00000536782 CMTM6Q9NX76 183 aa16.63■□□□□ 0.25
TNFRSF1B-204ENST00000536782 CAPN7Q9Y6W3 813 aa16.63■□□□□ 0.25
TNFRSF1B-204ENST00000536782 A0A087WUU8 490 aa16.62■□□□□ 0.25
TNFRSF1B-204ENST00000536782 XKRYO14609 159 aa16.62■□□□□ 0.25
TNFRSF1B-204ENST00000536782 DOK2O60496 412 aa16.62■□□□□ 0.25
TNFRSF1B-204ENST00000536782 PRSS23O95084 383 aa16.62■□□□□ 0.25
TNFRSF1B-204ENST00000536782 ZNF682O95780 498 aa16.62■□□□□ 0.25
TNFRSF1B-204ENST00000536782 FSHBP01225 129 aa16.62■□□□□ 0.25
TNFRSF1B-204ENST00000536782 IGHV2-70P01814 119 aa16.62■□□□□ 0.25
TNFRSF1B-204ENST00000536782 SBK2P0C263 348 aa16.62■□□□□ 0.25
TNFRSF1B-204ENST00000536782 TNFRSF1AP19438 455 aa16.62■□□□□ 0.25
TNFRSF1B-204ENST00000536782 HTR5AP47898 357 aa16.62■□□□□ 0.25
TNFRSF1B-204ENST00000536782 MBOAT2Q6ZWT7 520 aa16.62■□□□□ 0.25
TNFRSF1B-204ENST00000536782 ARPINQ7Z6K5 226 aa16.62■□□□□ 0.25
TNFRSF1B-204ENST00000536782 FAM156AQ8NDB6 213 aa16.62■□□□□ 0.25
TNFRSF1B-204ENST00000536782 RCN3Q96D15 328 aa16.62■□□□□ 0.25
TNFRSF1B-204ENST00000536782 SAMD8Q96LT4 415 aa16.62■□□□□ 0.25
TNFRSF1B-204ENST00000536782 DCAF16Q9NXF7 216 aa16.62■□□□□ 0.25
TNFRSF1B-204ENST00000536782 PURGQ9UJV8 347 aaKnown RBP16.62■□□□□ 0.25
TNFRSF1B-204ENST00000536782 ADAM18Q9Y3Q7 739 aa16.62■□□□□ 0.25
TNFRSF1B-204ENST00000536782 TANC2Q9HCD6 1990 aa16.62■□□□□ 0.25
TNFRSF1B-204ENST00000536782 CXCR6O00574 342 aa16.61■□□□□ 0.25
TNFRSF1B-204ENST00000536782 CDC42EP2O14613 210 aa16.61■□□□□ 0.25
TNFRSF1B-204ENST00000536782 SGCEO43556 437 aa16.61■□□□□ 0.25
TNFRSF1B-204ENST00000536782 AHCYL1O43865 530 aa16.61■□□□□ 0.25
TNFRSF1B-204ENST00000536782 CD14P08571 375 aa16.61■□□□□ 0.25
TNFRSF1B-204ENST00000536782 ZFP36P26651 326 aaKnown RBP16.61■□□□□ 0.25
TNFRSF1B-204ENST00000536782 GPR4P46093 362 aa16.61■□□□□ 0.25
TNFRSF1B-204ENST00000536782 ZBED5Q49AG3 693 aa16.61■□□□□ 0.25
TNFRSF1B-204ENST00000536782 IFI44LQ53G44 452 aa16.61■□□□□ 0.25
TNFRSF1B-204ENST00000536782 TBPL2Q6SJ96 375 aa16.61■□□□□ 0.25
TNFRSF1B-204ENST00000536782 TMPRSS11FQ6ZWK6 438 aa16.61■□□□□ 0.25
TNFRSF1B-204ENST00000536782 FKBP9P1Q75LS8 142 aa16.61■□□□□ 0.25
TNFRSF1B-204ENST00000536782 RRM2BQ7LG56 351 aa16.61■□□□□ 0.25
TNFRSF1B-204ENST00000536782 KLHL36Q8N4N3 616 aa16.61■□□□□ 0.25
TNFRSF1B-204ENST00000536782 SPICQ8N5J4 248 aa16.61■□□□□ 0.25
TNFRSF1B-204ENST00000536782 ZDHHC22Q8N966 263 aa16.61■□□□□ 0.25
TNFRSF1B-204ENST00000536782 OR2Z1Q8NG97 314 aa16.61■□□□□ 0.25
TNFRSF1B-204ENST00000536782 C22orf15Q8WYQ4 148 aa16.61■□□□□ 0.25
TNFRSF1B-204ENST00000536782 CMBLQ96DG6 245 aa16.61■□□□□ 0.25
TNFRSF1B-204ENST00000536782 Q96M85 177 aa16.61■□□□□ 0.25
TNFRSF1B-204ENST00000536782 NDEL1Q9GZM8 345 aa16.61■□□□□ 0.25
TNFRSF1B-204ENST00000536782 POFUT1Q9H488 388 aa16.61■□□□□ 0.25
TNFRSF1B-204ENST00000536782 NTN4Q9HB63 628 aa16.61■□□□□ 0.25
TNFRSF1B-204ENST00000536782 GMPR2Q9P2T1 348 aaKnown RBP16.61■□□□□ 0.25
TNFRSF1B-204ENST00000536782 TEX13CA0A0J9YWL9 993 aa16.6■□□□□ 0.25
TNFRSF1B-204ENST00000536782 PRSS37A4D1T9 235 aa16.6■□□□□ 0.25
TNFRSF1B-204ENST00000536782 GSTA4O15217 222 aa16.6■□□□□ 0.25
TNFRSF1B-204ENST00000536782 SPRY1O43609 319 aaPredicted RBP16.6■□□□□ 0.25
TNFRSF1B-204ENST00000536782 KITLGP21583 273 aa16.6■□□□□ 0.25
TNFRSF1B-204ENST00000536782 LIPEQ05469 1076 aa16.6■□□□□ 0.25
TNFRSF1B-204ENST00000536782 HNRNPA0Q13151 305 aaKnown RBP16.6■□□□□ 0.25
TNFRSF1B-204ENST00000536782 TMEM155Q4W5P6 130 aa16.6■□□□□ 0.25
TNFRSF1B-204ENST00000536782 MESTQ5EB52 335 aa16.6■□□□□ 0.25
TNFRSF1B-204ENST00000536782 CBLL1Q75N03 491 aa16.6■□□□□ 0.25
TNFRSF1B-204ENST00000536782 VASH1Q7L8A9 365 aaPredicted RBP16.6■□□□□ 0.25
TNFRSF1B-204ENST00000536782 SLC15A3Q8IY34 581 aa16.6■□□□□ 0.25
TNFRSF1B-204ENST00000536782 POU5F2Q8N7G0 328 aa16.6■□□□□ 0.25
TNFRSF1B-204ENST00000536782 ZNF283Q8N7M2 679 aa16.6■□□□□ 0.25
TNFRSF1B-204ENST00000536782 SGMS2Q8NHU3 365 aa16.6■□□□□ 0.25
TNFRSF1B-204ENST00000536782 RP9Q8TA86 221 aaKnown RBP16.6■□□□□ 0.25
TNFRSF1B-204ENST00000536782 COG8Q96MW5 612 aa16.6■□□□□ 0.25
TNFRSF1B-204ENST00000536782 ZNF570Q96NI8 536 aa16.6■□□□□ 0.25
TNFRSF1B-204ENST00000536782 PATZ1Q9HBE1 687 aaKnown RBP16.6■□□□□ 0.25
TNFRSF1B-204ENST00000536782 ESM1Q9NQ30 184 aa16.6■□□□□ 0.25
TNFRSF1B-204ENST00000536782 DDX28Q9NUL7 540 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms