RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 NIPBLQ6KC79 2804 aaeCLIP18.33■□□□□ 0.522e-6■■■■□ 19.3
PKP3-211ENST00000534401 OR6C6A6NF89 314 aa18.32■□□□□ 0.52
PKP3-211ENST00000534401 TFP02787 698 aa18.32■□□□□ 0.52
PKP3-211ENST00000534401 FAM157BP0CG42 384 aa18.32■□□□□ 0.52
PKP3-211ENST00000534401 NOS3P29474 1203 aa18.32■□□□□ 0.52
PKP3-211ENST00000534401 CCDC92Q53HC0 331 aaPredicted RBP18.32■□□□□ 0.52
PKP3-211ENST00000534401 RGS7BPQ6MZT1 257 aaPredicted RBP18.32■□□□□ 0.52
PKP3-211ENST00000534401 VASH1Q7L8A9 365 aaPredicted RBP18.32■□□□□ 0.52
PKP3-211ENST00000534401 ZNF101Q8IZC7 436 aa18.32■□□□□ 0.52
PKP3-211ENST00000534401 SDR9C7Q8NEX9 313 aa18.32■□□□□ 0.52
PKP3-211ENST00000534401 RBM4Q9BWF3 364 aaKnown RBP18.32■□□□□ 0.52
PKP3-211ENST00000534401 REG4Q9BYZ8 158 aa18.32■□□□□ 0.52
PKP3-211ENST00000534401 RPRD1BQ9NQG5 326 aaKnown RBP18.32■□□□□ 0.52
PKP3-211ENST00000534401 MYEF2Q9P2K5 600 aaKnown RBP18.32■□□□□ 0.52
PKP3-211ENST00000534401 NDRG4Q9ULP0 352 aaKnown RBP18.32■□□□□ 0.52
PKP3-211ENST00000534401 NF1P21359 2839 aa18.31■□□□□ 0.52
PKP3-211ENST00000534401 C5orf49A4QMS7 147 aa18.31■□□□□ 0.52
PKP3-211ENST00000534401 SGCEO43556 437 aa18.31■□□□□ 0.52
PKP3-211ENST00000534401 GPANK1O95872 356 aa18.31■□□□□ 0.52
PKP3-211ENST00000534401 CSF3P09919 207 aa18.31■□□□□ 0.52
PKP3-211ENST00000534401 ERVS71-1P61550 626 aa18.31■□□□□ 0.52
PKP3-211ENST00000534401 GLO1Q04760 184 aa18.31■□□□□ 0.52
PKP3-211ENST00000534401 ZNF525Q8N782 197 aa18.31■□□□□ 0.52
PKP3-211ENST00000534401 OR2T33Q8NG76 320 aa18.31■□□□□ 0.52
PKP3-211ENST00000534401 C10orf105Q8TEF2 133 aa18.31■□□□□ 0.52
PKP3-211ENST00000534401 NEU4Q8WWR8 484 aaPredicted RBP18.31■□□□□ 0.52
PKP3-211ENST00000534401 MARS2Q96GW9 593 aaKnown RBP18.31■□□□□ 0.52
PKP3-211ENST00000534401 RAB1BQ9H0U4 201 aa18.31■□□□□ 0.52
PKP3-211ENST00000534401 RERGLQ9H628 205 aa18.31■□□□□ 0.52
PKP3-211ENST00000534401 MYOZ1Q9NP98 299 aaPredicted RBP18.31■□□□□ 0.52
PKP3-211ENST00000534401 TBC1D23Q9NUY8 699 aa18.31■□□□□ 0.52
PKP3-211ENST00000534401 PDP1Q9P0J1 537 aaPredicted RBP18.31■□□□□ 0.52
PKP3-211ENST00000534401 ASH2LQ9UBL3 628 aa18.31■□□□□ 0.52
PKP3-211ENST00000534401 IGHV4-30-2A0A087WSY4 118 aa18.3■□□□□ 0.52
PKP3-211ENST00000534401 FAM171A2A8MVW0 826 aa18.3■□□□□ 0.52
PKP3-211ENST00000534401 VWC2LB2RUY7 222 aa18.3■□□□□ 0.52
PKP3-211ENST00000534401 H3BSA7 217 aa18.3■□□□□ 0.52
PKP3-211ENST00000534401 GNGT2O14610 69 aa18.3■□□□□ 0.52
PKP3-211ENST00000534401 DEAF1O75398 565 aaPredicted RBP18.3■□□□□ 0.52
PKP3-211ENST00000534401 SOX14O95416 240 aa18.3■□□□□ 0.52
PKP3-211ENST00000534401 IGHV3-13P01766 116 aa18.3■□□□□ 0.52
PKP3-211ENST00000534401 ANXA8P13928 327 aa18.3■□□□□ 0.52
PKP3-211ENST00000534401 SLC25A1P53007 311 aa18.3■□□□□ 0.52
PKP3-211ENST00000534401 DBPQ10586 325 aaPredicted RBP18.3■□□□□ 0.52
PKP3-211ENST00000534401 CCNIQ14094 377 aa18.3■□□□□ 0.52
PKP3-211ENST00000534401 SHQ1Q6PI26 577 aaKnown RBP18.3■□□□□ 0.52
PKP3-211ENST00000534401 HS3ST5Q8IZT8 346 aa18.3■□□□□ 0.52
PKP3-211ENST00000534401 ZCCHC24Q8N2G6 241 aaKnown RBP18.3■□□□□ 0.52
PKP3-211ENST00000534401 SLC37A3Q8NCC5 494 aa18.3■□□□□ 0.52
PKP3-211ENST00000534401 ZNRF4Q8WWF5 429 aa18.3■□□□□ 0.52
PKP3-211ENST00000534401 SMR3AQ99954 134 aa18.3■□□□□ 0.52
PKP3-211ENST00000534401 RHNO1Q9BSD3 238 aa18.3■□□□□ 0.52
PKP3-211ENST00000534401 MS4A5Q9H3V2 200 aa18.3■□□□□ 0.52
PKP3-211ENST00000534401 CMC2Q9NRP2 79 aa18.3■□□□□ 0.52
PKP3-211ENST00000534401 TBCCD1Q9NVR7 557 aa18.3■□□□□ 0.52
PKP3-211ENST00000534401 MRPL22Q9NWU5 206 aaKnown RBP18.3■□□□□ 0.52
PKP3-211ENST00000534401 KLHL21Q9UJP4 597 aa18.3■□□□□ 0.52
PKP3-211ENST00000534401 M0R233 179 aa18.29■□□□□ 0.52
PKP3-211ENST00000534401 LY6HO94772 140 aa18.29■□□□□ 0.52
PKP3-211ENST00000534401 CLPTM1O96005 669 aa18.29■□□□□ 0.52
PKP3-211ENST00000534401 ADRA2AP08913 450 aa18.29■□□□□ 0.52
PKP3-211ENST00000534401 TUBG1P23258 451 aa18.29■□□□□ 0.52
PKP3-211ENST00000534401 GRK5P34947 590 aa18.29■□□□□ 0.52
PKP3-211ENST00000534401 GGT2P36268 569 aa18.29■□□□□ 0.52
PKP3-211ENST00000534401 TEKQ02763 1124 aa18.29■□□□□ 0.52
PKP3-211ENST00000534401 KRTAP1-1Q07627 177 aa18.29■□□□□ 0.52
PKP3-211ENST00000534401 MEP1BQ16820 701 aa18.29■□□□□ 0.52
PKP3-211ENST00000534401 RSPO1Q2MKA7 263 aaPredicted RBP18.29■□□□□ 0.52
PKP3-211ENST00000534401 KRTAP27-1Q3LI81 207 aa18.29■□□□□ 0.52
PKP3-211ENST00000534401 SLC36A3Q495N2 470 aa18.29■□□□□ 0.52
PKP3-211ENST00000534401 MBNL2Q5VZF2 373 aaKnown RBP18.29■□□□□ 0.52
PKP3-211ENST00000534401 OTPQ5XKR4 325 aa18.29■□□□□ 0.52
PKP3-211ENST00000534401 CLEC2AQ6UVW9 174 aa18.29■□□□□ 0.52
PKP3-211ENST00000534401 UNQ6126/PRO20091Q6UXV3 157 aa18.29■□□□□ 0.52
PKP3-211ENST00000534401 CYB561A3Q8NBI2 242 aa18.29■□□□□ 0.52
PKP3-211ENST00000534401 GJC3Q8NFK1 279 aa18.29■□□□□ 0.52
PKP3-211ENST00000534401 SYNPRQ8TBG9 265 aa18.29■□□□□ 0.52
PKP3-211ENST00000534401 C4orf45Q96LM5 186 aa18.29■□□□□ 0.52
PKP3-211ENST00000534401 VRK1Q99986 396 aaPredicted RBP18.29■□□□□ 0.52
PKP3-211ENST00000534401 SYT3Q9BQG1 590 aa18.29■□□□□ 0.52
PKP3-211ENST00000534401 FN3KQ9H479 309 aa18.29■□□□□ 0.52
PKP3-211ENST00000534401 TUBG2Q9NRH3 451 aa18.29■□□□□ 0.52
PKP3-211ENST00000534401 EIF3KQ9UBQ5 218 aaKnown RBP18.29■□□□□ 0.52
PKP3-211ENST00000534401 CYB5R1Q9UHQ9 305 aa18.29■□□□□ 0.52
PKP3-211ENST00000534401 KCNG2Q9UJ96 466 aa18.29■□□□□ 0.52
PKP3-211ENST00000534401 ZFHX3Q15911 3703 aa18.29■□□□□ 0.52
PKP3-211ENST00000534401 RNF223E7ERA6 249 aa18.28■□□□□ 0.52
PKP3-211ENST00000534401 NDUFS8O00217 210 aa18.28■□□□□ 0.52
PKP3-211ENST00000534401 RER1O15258 196 aa18.28■□□□□ 0.52
PKP3-211ENST00000534401 DOK2O60496 412 aa18.28■□□□□ 0.52
PKP3-211ENST00000534401 TIPRLO75663 272 aa18.28■□□□□ 0.52
PKP3-211ENST00000534401 LY6G6DO95868 133 aa18.28■□□□□ 0.52
PKP3-211ENST00000534401 NGFP01138 241 aa18.28■□□□□ 0.52
PKP3-211ENST00000534401 LCKP06239 509 aa18.28■□□□□ 0.52
PKP3-211ENST00000534401 SLC25A16P16260 332 aa18.28■□□□□ 0.52
PKP3-211ENST00000534401 PRKACGP22612 351 aa18.28■□□□□ 0.52
PKP3-211ENST00000534401 ERFP50548 548 aa18.28■□□□□ 0.52
PKP3-211ENST00000534401 KLF3P57682 345 aaPredicted RBP18.28■□□□□ 0.52
PKP3-211ENST00000534401 ATP6AP1Q15904 470 aa18.28■□□□□ 0.52
PKP3-211ENST00000534401 PCK2Q16822 640 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms