RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 BOD1Q96IK1 185 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 RHNO1Q9BSD3 238 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 WNT5BQ9H1J7 359 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 ADGRL4Q9HBW9 690 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 CRIM1Q9NZV1 1036 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 GDF2Q9UK05 429 aaPredicted RBP11.95□□□□□ -0.5
CD44-224ENST00000526669 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.95□□□□□ -0.5
CD44-224ENST00000526669 COPS3Q9UNS2 423 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 KLHDC2Q9Y2U9 406 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 CACNA1DQ01668 2161 aa11.95□□□□□ -0.5
CD44-224ENST00000526669 DSCAMO60469 2012 aa11.94□□□□□ -0.5
CD44-224ENST00000526669 HRNRQ86YZ3 2850 aaPredicted RBP11.94□□□□□ -0.5
CD44-224ENST00000526669 XPNPEP2O43895 674 aa11.94□□□□□ -0.5
CD44-224ENST00000526669 SBK2P0C263 348 aa11.94□□□□□ -0.5
CD44-224ENST00000526669 IGFBP2P18065 325 aa11.94□□□□□ -0.5
CD44-224ENST00000526669 APEX1P27695 318 aaKnown RBP11.94□□□□□ -0.5
CD44-224ENST00000526669 ATP6V1E1P36543 226 aa11.94□□□□□ -0.5
CD44-224ENST00000526669 MTNR1AP48039 350 aa11.94□□□□□ -0.5
CD44-224ENST00000526669 PCBD1P61457 104 aa11.94□□□□□ -0.5
CD44-224ENST00000526669 CCDC92Q53HC0 331 aaPredicted RBP11.94□□□□□ -0.5
CD44-224ENST00000526669 KRT80Q6KB66 452 aa11.94□□□□□ -0.5
CD44-224ENST00000526669 SLC16A9Q7RTY1 509 aa11.94□□□□□ -0.5
CD44-224ENST00000526669 DCXRQ7Z4W1 244 aa11.94□□□□□ -0.5
CD44-224ENST00000526669 CDC20BQ86Y33 519 aa11.94□□□□□ -0.5
CD44-224ENST00000526669 DMRTC2Q8IXT2 367 aaPredicted RBP11.94□□□□□ -0.5
CD44-224ENST00000526669 CCDC36Q8IYA8 594 aa11.94□□□□□ -0.5
CD44-224ENST00000526669 RFLNBQ8N5W9 214 aa11.94□□□□□ -0.5
CD44-224ENST00000526669 BPIFB6Q8NFQ5 453 aa11.94□□□□□ -0.5
CD44-224ENST00000526669 FBLIM1Q8WUP2 373 aa11.94□□□□□ -0.5
CD44-224ENST00000526669 LGALS12Q96DT0 336 aa11.94□□□□□ -0.5
CD44-224ENST00000526669 MAP6Q96JE9 813 aa11.94□□□□□ -0.5
CD44-224ENST00000526669 AMELYQ99218 206 aa11.94□□□□□ -0.5
CD44-224ENST00000526669 OR2H1Q9GZK4 316 aa11.94□□□□□ -0.5
CD44-224ENST00000526669 Q9H521 79 aa11.94□□□□□ -0.5
CD44-224ENST00000526669 OBP2BQ9NPH6 170 aa11.94□□□□□ -0.5
CD44-224ENST00000526669 PLEK2Q9NYT0 353 aa11.94□□□□□ -0.5
CD44-224ENST00000526669 CYB5R1Q9UHQ9 305 aa11.94□□□□□ -0.5
CD44-224ENST00000526669 CHD3Q12873 2000 aaKnown RBP11.93□□□□□ -0.5
CD44-224ENST00000526669 IGHV1-18A0A0C4DH31 117 aa11.93□□□□□ -0.5
CD44-224ENST00000526669 SNTNA6NMZ2 147 aa11.93□□□□□ -0.5
CD44-224ENST00000526669 SGCEO43556 437 aa11.93□□□□□ -0.5
CD44-224ENST00000526669 CCL2P13500 99 aa11.93□□□□□ -0.5
CD44-224ENST00000526669 CBR1P16152 277 aa11.93□□□□□ -0.5
CD44-224ENST00000526669 ARR3P36575 388 aa11.93□□□□□ -0.5
CD44-224ENST00000526669 HTR5AP47898 357 aa11.93□□□□□ -0.5
CD44-224ENST00000526669 SCRN3Q0VDG4 424 aa11.93□□□□□ -0.5
CD44-224ENST00000526669 C6orf141Q5SZD1 244 aa11.93□□□□□ -0.5
CD44-224ENST00000526669 ZNF584Q8IVC4 421 aa11.93□□□□□ -0.5
CD44-224ENST00000526669 OR10H4Q8NGA5 316 aa11.93□□□□□ -0.5
CD44-224ENST00000526669 THEM6Q8WUY1 208 aa11.93□□□□□ -0.5
CD44-224ENST00000526669 SLC7A6Q92536 515 aa11.93□□□□□ -0.5
CD44-224ENST00000526669 ZNF75AQ96N20 296 aa11.93□□□□□ -0.5
CD44-224ENST00000526669 CENPMQ9NSP4 180 aa11.93□□□□□ -0.5
CD44-224ENST00000526669 HAO2Q9NYQ3 351 aa11.93□□□□□ -0.5
CD44-224ENST00000526669 UBAP1Q9NZ09 502 aa11.93□□□□□ -0.5
CD44-224ENST00000526669 LAMP5Q9UJQ1 280 aa11.93□□□□□ -0.5
CD44-224ENST00000526669 RPL36Q9Y3U8 105 aaKnown RBP11.93□□□□□ -0.5
CD44-224ENST00000526669 TIMM10BQ9Y5J6 103 aa11.93□□□□□ -0.5
CD44-224ENST00000526669 IQCMA0A1B0GVH7 501 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 PSMD9O00233 223 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 SLC1A7O00341 560 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 CASKO14936 926 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 SIAH2O43255 324 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 DENRO43583 198 aaKnown RBP11.92□□□□□ -0.5
CD44-224ENST00000526669 TMCC2O75069 709 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 LYNP07948 512 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 CECR9P0C854 216 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 EPXP11678 715 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 CRYGSP22914 178 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 PLP2Q04941 152 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 SPOCK1Q08629 439 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 POU4F2Q12837 409 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 TMED1Q13445 227 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 RAB35Q15286 201 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 TEX30Q5JUR7 227 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 SP5Q6BEB4 398 aaPredicted RBP11.92□□□□□ -0.5
CD44-224ENST00000526669 HIST2H2BCQ6DN03 193 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 VASH1Q7L8A9 365 aaPredicted RBP11.92□□□□□ -0.5
CD44-224ENST00000526669 SSX6Q7RTT6 188 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 SYT9Q86SS6 491 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 CPEB3Q8NE35 698 aaKnown RBP11.92□□□□□ -0.5
CD44-224ENST00000526669 GJC3Q8NFK1 279 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 OR52I1Q8NGK6 324 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 OR10S1Q8NGN2 331 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 OTOSQ8NHW6 89 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 ST7LQ8TDW4 575 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 GGHQ92820 318 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 SLAMF6Q96DU3 332 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 PLPPR2Q96GM1 343 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 DACH2Q96NX9 599 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 USB1Q9BQ65 265 aaKnown RBP11.92□□□□□ -0.5
CD44-224ENST00000526669 ABHD6Q9BV23 337 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 YIPF3Q9GZM5 350 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 C1orf198Q9H425 327 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 ARFGEF3Q5TH69 2177 aa11.92□□□□□ -0.5
CD44-224ENST00000526669 RAI1Q7Z5J4 1906 aaPredicted RBP11.92□□□□□ -0.5
CD44-224ENST00000526669 NBPF19A0A087WUL8 3843 aa11.91□□□□□ -0.5
CD44-224ENST00000526669 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.91□□□□□ -0.5
CD44-224ENST00000526669 DPRXA6NFQ7 191 aa11.91□□□□□ -0.5
CD44-224ENST00000526669 PRR32B1ATL7 298 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms