RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 PTHP01270 115 aa11.32□□□□□ -0.6
PABPC1-205ENST00000518196 THBDP07204 575 aa11.32□□□□□ -0.6
PABPC1-205ENST00000518196 COX6B1P14854 86 aa11.32□□□□□ -0.6
PABPC1-205ENST00000518196 ZNF32P17041 273 aa11.32□□□□□ -0.6
PABPC1-205ENST00000518196 GABRB1P18505 474 aa11.32□□□□□ -0.6
PABPC1-205ENST00000518196 HTR1FP30939 366 aa11.32□□□□□ -0.6
PABPC1-205ENST00000518196 ENTPD1P49961 510 aa11.32□□□□□ -0.6
PABPC1-205ENST00000518196 PIGFQ07326 219 aa11.32□□□□□ -0.6
PABPC1-205ENST00000518196 SCRN3Q0VDG4 424 aa11.32□□□□□ -0.6
PABPC1-205ENST00000518196 AQP6Q13520 282 aa11.32□□□□□ -0.6
PABPC1-205ENST00000518196 ENDOGQ14249 297 aaKnown RBP11.32□□□□□ -0.6
PABPC1-205ENST00000518196 MAD2L1BPQ15013 274 aaPredicted RBP11.32□□□□□ -0.6
PABPC1-205ENST00000518196 C3orf36Q3SXR2 165 aa11.32□□□□□ -0.6
PABPC1-205ENST00000518196 C22orf34Q6ZV56 151 aa11.32□□□□□ -0.6
PABPC1-205ENST00000518196 USP51Q70EK9 711 aa11.32□□□□□ -0.6
PABPC1-205ENST00000518196 SHFQ7M4L6 423 aa11.32□□□□□ -0.6
PABPC1-205ENST00000518196 MDP1Q86V88 176 aa11.32□□□□□ -0.6
PABPC1-205ENST00000518196 ERI1Q8IV48 349 aaKnown RBP11.32□□□□□ -0.6
PABPC1-205ENST00000518196 FAM169BQ8N8A8 192 aa11.32□□□□□ -0.6
PABPC1-205ENST00000518196 GJC3Q8NFK1 279 aa11.32□□□□□ -0.6
PABPC1-205ENST00000518196 FGFBP3Q8TAT2 258 aa11.32□□□□□ -0.6
PABPC1-205ENST00000518196 FBXO17Q96EF6 278 aa11.32□□□□□ -0.6
PABPC1-205ENST00000518196 ZNF184Q99676 751 aaPredicted RBP11.32□□□□□ -0.6
PABPC1-205ENST00000518196 C1QTNF6Q9BXI9 259 aa11.32□□□□□ -0.6
PABPC1-205ENST00000518196 Q9H521 79 aa11.32□□□□□ -0.6
PABPC1-205ENST00000518196 ZNF224Q9NZL3 707 aa11.32□□□□□ -0.6
PABPC1-205ENST00000518196 CRIM1Q9NZV1 1036 aa11.32□□□□□ -0.6
PABPC1-205ENST00000518196 RAB26Q9ULW5 256 aa11.32□□□□□ -0.6
PABPC1-205ENST00000518196 COMMD3-BMI1R4GMX3 469 aa11.32□□□□□ -0.6
PABPC1-205ENST00000518196 FLNCQ14315 2725 aa11.32□□□□□ -0.6
PABPC1-205ENST00000518196 HEATR1Q9H583 2144 aaKnown RBP11.32□□□□□ -0.6
PABPC1-205ENST00000518196 USP9XQ93008 2570 aaPredicted RBP11.31□□□□□ -0.6
PABPC1-205ENST00000518196 IQCMA0A1B0GVH7 501 aa11.31□□□□□ -0.6
PABPC1-205ENST00000518196 M0R1B8 84 aa11.31□□□□□ -0.6
PABPC1-205ENST00000518196 ZNF593O00488 134 aaPredicted RBP11.31□□□□□ -0.6
PABPC1-205ENST00000518196 PATE4P0C8F1 98 aa11.31□□□□□ -0.6
PABPC1-205ENST00000518196 CRYGSP22914 178 aa11.31□□□□□ -0.6
PABPC1-205ENST00000518196 ZNF83P51522 516 aa11.31□□□□□ -0.6
PABPC1-205ENST00000518196 ISL1P61371 349 aa11.31□□□□□ -0.6
PABPC1-205ENST00000518196 TEX30Q5JUR7 227 aa11.31□□□□□ -0.6
PABPC1-205ENST00000518196 OTPQ5XKR4 325 aa11.31□□□□□ -0.6
PABPC1-205ENST00000518196 LYPD4Q6UWN0 246 aa11.31□□□□□ -0.6
PABPC1-205ENST00000518196 SLC16A9Q7RTY1 509 aa11.31□□□□□ -0.6
PABPC1-205ENST00000518196 THAP5Q7Z6K1 395 aa11.31□□□□□ -0.6
PABPC1-205ENST00000518196 ACBD4Q8NC06 268 aa11.31□□□□□ -0.6
PABPC1-205ENST00000518196 OR6N2Q8NGY6 317 aa11.31□□□□□ -0.6
PABPC1-205ENST00000518196 WDR76Q9H967 626 aa11.31□□□□□ -0.6
PABPC1-205ENST00000518196 HAO2Q9NYQ3 351 aa11.31□□□□□ -0.6
PABPC1-205ENST00000518196 ASH2LQ9UBL3 628 aa11.31□□□□□ -0.6
PABPC1-205ENST00000518196 AASSQ9UDR5 926 aa11.31□□□□□ -0.6
PABPC1-205ENST00000518196 PLEKHB1Q9UF11 243 aaPredicted RBP11.31□□□□□ -0.6
PABPC1-205ENST00000518196 KCNN3Q9UGI6 736 aa11.31□□□□□ -0.6
PABPC1-205ENST00000518196 ICE1Q9Y2F5 2266 aa11.3□□□□□ -0.6
PABPC1-205ENST00000518196 PRR14LQ5THK1 2151 aa11.3□□□□□ -0.6
PABPC1-205ENST00000518196 ZNF503-AS2A6NEH8 195 aa11.3□□□□□ -0.6
PABPC1-205ENST00000518196 SGCEO43556 437 aa11.3□□□□□ -0.6
PABPC1-205ENST00000518196 MMP7P09237 267 aaPredicted RBP11.3□□□□□ -0.6
PABPC1-205ENST00000518196 GNAO1P09471 354 aa11.3□□□□□ -0.6
PABPC1-205ENST00000518196 SPARCP09486 303 aa11.3□□□□□ -0.6
PABPC1-205ENST00000518196 MYF6P23409 242 aa11.3□□□□□ -0.6
PABPC1-205ENST00000518196 PTAFRP25105 342 aa11.3□□□□□ -0.6
PABPC1-205ENST00000518196 ATP6V1E1P36543 226 aa11.3□□□□□ -0.6
PABPC1-205ENST00000518196 NAA10P41227 235 aaPredicted RBP11.3□□□□□ -0.6
PABPC1-205ENST00000518196 IDH3GP51553 393 aaPredicted RBP11.3□□□□□ -0.6
PABPC1-205ENST00000518196 GGTLC2Q14390 218 aa11.3□□□□□ -0.6
PABPC1-205ENST00000518196 RAB39AQ14964 217 aa11.3□□□□□ -0.6
PABPC1-205ENST00000518196 BEX5Q5H9J7 111 aa11.3□□□□□ -0.6
PABPC1-205ENST00000518196 PABPC1L2AQ5JQF8 200 aa11.3□□□□□ -0.6
PABPC1-205ENST00000518196 TMEM108Q6UXF1 575 aa11.3□□□□□ -0.6
PABPC1-205ENST00000518196 B3GLCTQ6Y288 498 aa11.3□□□□□ -0.6
PABPC1-205ENST00000518196 LINC00346Q8IVM7 164 aa11.3□□□□□ -0.6
PABPC1-205ENST00000518196 TIGD4Q8IY51 512 aa11.3□□□□□ -0.6
PABPC1-205ENST00000518196 IL17RDQ8NFM7 739 aa11.3□□□□□ -0.6
PABPC1-205ENST00000518196 CNN2Q99439 309 aaKnown RBP11.3□□□□□ -0.6
PABPC1-205ENST00000518196 KCNS3Q9BQ31 491 aa11.3□□□□□ -0.6
PABPC1-205ENST00000518196 ANKRD60Q9BZ19 345 aa11.3□□□□□ -0.6
PABPC1-205ENST00000518196 OR2H1Q9GZK4 316 aa11.3□□□□□ -0.6
PABPC1-205ENST00000518196 YIPF3Q9GZM5 350 aa11.3□□□□□ -0.6
PABPC1-205ENST00000518196 C1orf198Q9H425 327 aa11.3□□□□□ -0.6
PABPC1-205ENST00000518196 ESRP2Q9H6T0 727 aaKnown RBP11.3□□□□□ -0.6
PABPC1-205ENST00000518196 CRNNQ9UBG3 495 aaPredicted RBP11.3□□□□□ -0.6
PABPC1-205ENST00000518196 CYB5R1Q9UHQ9 305 aa11.3□□□□□ -0.6
PABPC1-205ENST00000518196 RPL36Q9Y3U8 105 aaKnown RBP11.3□□□□□ -0.6
PABPC1-205ENST00000518196 LHFPL6Q9Y693 200 aa11.3□□□□□ -0.6
PABPC1-205ENST00000518196 DOPEY2Q9Y3R5 2298 aa11.3□□□□□ -0.6
PABPC1-205ENST00000518196 HELZ2Q9BYK8 2649 aaKnown RBP11.29□□□□□ -0.6
PABPC1-205ENST00000518196 SELENOFO60613 162 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 GOSR1O95249 250 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 GHRHP01286 108 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 IGKV3-15P01624 115 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 SERPINA5P05154 406 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 MRPL3P09001 348 aaKnown RBP11.29□□□□□ -0.6
PABPC1-205ENST00000518196 APLNRP35414 380 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 MTNR1AP48039 350 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 NR1H2P55055 460 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 HIST1H3AP68431 136 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 PSG4Q00888 419 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 CDK5R2Q13319 367 aa11.29□□□□□ -0.6
PABPC1-205ENST00000518196 EIF2B1Q14232 305 aaKnown RBP11.29□□□□□ -0.6
PABPC1-205ENST00000518196 DAZAP2Q15038 168 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms