RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 WDR20Q8TBZ3 569 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 RND1Q92730 232 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 SLC35B4Q969S0 331 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 GPX7Q96SL4 187 aaPredicted RBP5.01□□□□□ -1.61
USF3-202ENST00000478658 ORAI2Q96SN7 254 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 LRFN3Q9BTN0 628 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 ISCA1Q9BUE6 129 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 ULBP2Q9BZM5 246 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 OR52A1Q9UKL2 312 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 GABRQQ9UN88 632 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 NCOA3Q9Y6Q9 1424 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 LINC01549A6NIU2 74 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 MT-ATP6P00846 226 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 NRASP01111 189 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 IL4P05112 153 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 SPI1P17947 270 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 POLR2CP19387 275 aaPredicted RBP5.01□□□□□ -1.61
USF3-202ENST00000478658 MAT2AP31153 395 aaKnown RBP5.01□□□□□ -1.61
USF3-202ENST00000478658 XCR1P46094 333 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 RGRP47804 291 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 DNAJB13P59910 316 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 LSM11P83369 360 aaKnown RBP eCLIP5.01□□□□□ -1.61
USF3-202ENST00000478658 ANKRD55Q3KP44 614 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 ELP2Q6IA86 826 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 FAM71E1Q6IPT2 247 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 MAMSTRQ6ZN01 415 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 VKORC1L1Q8N0U8 176 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 C19orf47Q8N9M1 422 aaKnown RBP5.01□□□□□ -1.61
USF3-202ENST00000478658 APOBEC4Q8WW27 367 aaKnown RBP5.01□□□□□ -1.61
USF3-202ENST00000478658 BRI3BPQ8WY22 251 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 CDS1Q92903 461 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 RAB3CQ96E17 227 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 HMCESQ96FZ2 354 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 BANF2Q9H503 90 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 RIMS3Q9UJD0 308 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 FZD10Q9ULW2 581 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 DTX4Q9Y2E6 619 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 A0A1W2PP18 115 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 H3BVH4 76 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 PEX10O60683 326 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 CFDP00746 253 aaPredicted RBP5.01□□□□□ -1.61
USF3-202ENST00000478658 SP1P08047 785 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 ITGAMP11215 1152 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 NDUFB7P17568 137 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 PYCR1P32322 319 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 MTNR1BP49286 362 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 UCP3P55916 312 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 DSC1Q08554 894 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 WDR25Q64LD2 544 aaPredicted RBP5.01□□□□□ -1.61
USF3-202ENST00000478658 EBLN2Q6P2I7 272 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 OR13H1Q8NG92 308 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 PAQR8Q8TEZ7 354 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 UBE2FQ969M7 185 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 SLC35C1Q96A29 364 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 SLC35A4Q96G79 324 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 PISDQ9UG56 409 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 IL19Q9UHD0 177 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 BOLA1Q9Y3E2 137 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 ZNFX1Q9P2E3 1918 aaKnown RBP5.01□□□□□ -1.61
USF3-202ENST00000478658 RTTNQ86VV8 2226 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 FER1L4A9Z1Z3 1794 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 C17orf51A8MQB3 221 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 A8MUA0 341 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 F8WEM9 126 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 J3KR12 359 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 OR7C2O60412 319 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 SLC18A1P54219 525 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 CMC4P56277 68 aaPredicted RBP5.01□□□□□ -1.61
USF3-202ENST00000478658 CLDN17P56750 224 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 SNRPGP62308 76 aaKnown RBP5.01□□□□□ -1.61
USF3-202ENST00000478658 RPL32P62910 135 aaKnown RBP5.01□□□□□ -1.61
USF3-202ENST00000478658 RAB40BQ12829 278 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 TEX30Q5JUR7 227 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 NRMQ8IXM6 262 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 EXD3Q8N9H8 876 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 NPEPL1Q8NDH3 523 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 EMG1Q92979 244 aaKnown RBP5.01□□□□□ -1.61
USF3-202ENST00000478658 AGPAT5Q9NUQ2 364 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 APOBEC3BQ9UH17 382 aaKnown RBP5.01□□□□□ -1.61
USF3-202ENST00000478658 DOCK10Q96BY6 2186 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 KBTBD11-OT1A0A1B0GTJ5 212 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 DHRS7CA6NNS2 312 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 MPIG6BO95866 241 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 ACVR1BP36896 505 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 POLR2IP36954 125 aaKnown RBP5.01□□□□□ -1.61
USF3-202ENST00000478658 GANABQ14697 944 aaKnown RBP5.01□□□□□ -1.61
USF3-202ENST00000478658 OR6V1Q8N148 313 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 ARHGEF39Q8N4T4 335 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 SLC30A3Q99726 388 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 GABARAPL3Q9BY60 117 aa5.01□□□□□ -1.61
USF3-202ENST00000478658 ZCCHC17Q9NP64 241 aaKnown RBP5.01□□□□□ -1.61
USF3-202ENST00000478658 SCN4AP35499 1836 aa5□□□□□ -1.61
USF3-202ENST00000478658 PARP4Q9UKK3 1724 aaKnown RBP5□□□□□ -1.61
USF3-202ENST00000478658 A0A0J9YY10 115 aa5□□□□□ -1.61
USF3-202ENST00000478658 OR6C76A6NM76 312 aa5□□□□□ -1.61
USF3-202ENST00000478658 HRO43593 1189 aa5□□□□□ -1.61
USF3-202ENST00000478658 LIMS3P0CW19 117 aa5□□□□□ -1.61
USF3-202ENST00000478658 LIMS4P0CW20 117 aa5□□□□□ -1.61
USF3-202ENST00000478658 SLC22A6Q4U2R8 563 aa5□□□□□ -1.61
USF3-202ENST00000478658 FAM169BQ8N8A8 192 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms