RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 FJX1Q86VR8 437 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 CXorf67Q86X51 503 aaPredicted RBP5.2□□□□□ -1.58
USP39-213ENST00000467885 ERI1Q8IV48 349 aaKnown RBP5.2□□□□□ -1.58
USP39-213ENST00000467885 SLC35F2Q8IXU6 374 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 LRRC18Q8N456 261 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 RFLNBQ8N5W9 214 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 CPEB3Q8NE35 698 aaKnown RBP5.2□□□□□ -1.58
USP39-213ENST00000467885 TSPAN14Q8NG11 270 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 OR1K1Q8NGR3 316 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 OR6K6Q8NGW6 343 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 ST7LQ8TDW4 575 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 THEM6Q8WUY1 208 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 PPP1R14AQ96A00 147 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 CCDC120Q96HB5 630 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 INTS14Q96SY0 518 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 MNTQ99583 582 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 WACQ9BTA9 647 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 ABHD6Q9BV23 337 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 CDADC1Q9BWV3 514 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 ISG20L2Q9H9L3 353 aaKnown RBP5.2□□□□□ -1.58
USP39-213ENST00000467885 PNRC2Q9NPJ4 139 aaKnown RBP5.2□□□□□ -1.58
USP39-213ENST00000467885 BABAM2Q9NXR7 383 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 SLCO1C1Q9NYB5 712 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 ELOVL5Q9NYP7 299 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 LSM2Q9Y333 95 aaKnown RBP5.2□□□□□ -1.58
USP39-213ENST00000467885 TIMM10BQ9Y5J6 103 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 COMMD3-BMI1R4GMX3 469 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 A0A087WXM4 84 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 A0A1W2PPL8 197 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 DAPL1A0PJW8 107 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 IRGMA1A4Y4 181 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 EIF4E1BA6NMX2 242 aaKnown RBP5.19□□□□□ -1.58
USP39-213ENST00000467885 ZNF587BE7ETH6 402 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 E9PI62 339 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 OGG1O15527 345 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 RGS10O43665 173 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 TMCC2O75069 709 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 SRSF10O75494 262 aaKnown RBP5.19□□□□□ -1.58
USP39-213ENST00000467885 LYZL6O75951 148 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 SEC14L2O76054 403 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 RAB36O95755 333 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 LALBAP00709 142 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 HLA-HP01893 362 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 SMIM18P0DKX4 95 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 NR2C1P13056 603 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 HOXB4P17483 251 aaPredicted RBP5.19□□□□□ -1.58
USP39-213ENST00000467885 PSMB1P20618 241 aaKnown RBP5.19□□□□□ -1.58
USP39-213ENST00000467885 COX5AP20674 150 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 BMP5P22003 454 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 EEF1B2P24534 225 aaKnown RBP5.19□□□□□ -1.58
USP39-213ENST00000467885 CHRNB4P30926 498 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 CD79BP40259 229 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 NAA10P41227 235 aaPredicted RBP5.19□□□□□ -1.58
USP39-213ENST00000467885 GABARAPL2P60520 117 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 RAB1AP62820 205 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 TUBA4AP68366 448 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 ADAM8P78325 824 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 KRTAP27-1Q3LI81 207 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 TBRG1Q3YBR2 411 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 FBXL19-AS1Q494R0 122 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 CDONQ4KMG0 1287 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 HIKESHIQ53FT3 197 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 OR2G6Q5TZ20 316 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 OR7E24Q6IFN5 339 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 ZNF773Q6PK81 442 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 DEGS2Q6QHC5 323 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 KLHL24Q6TFL4 600 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 CFAP77Q6ZQR2 320 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 KCTD8Q6ZWB6 473 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 DCXRQ7Z4W1 244 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 ABHD12BQ7Z5M8 362 aaPredicted RBP5.19□□□□□ -1.58
USP39-213ENST00000467885 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.19□□□□□ -1.58
USP39-213ENST00000467885 MRGPRGQ86SM5 289 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 LUZP2Q86TE4 346 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 LINC00346Q8IVM7 164 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 CCDC36Q8IYA8 594 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 STX19Q8N4C7 294 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 GJC3Q8NFK1 279 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 OR6N2Q8NGY6 317 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 RNF133Q8WVZ7 376 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 GATAD2BQ8WXI9 593 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 TMIGD2Q96BF3 282 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 ALKBH3Q96Q83 286 aaPredicted RBP5.19□□□□□ -1.58
USP39-213ENST00000467885 OR5M11Q96RB7 305 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 CNN2Q99439 309 aaKnown RBP5.19□□□□□ -1.58
USP39-213ENST00000467885 TBX5Q99593 518 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 WNT5BQ9H1J7 359 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 ELOVL3Q9HB03 270 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 NOX3Q9HBY0 568 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 ACOT13Q9NPJ3 140 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 SLC17A5Q9NRA2 495 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 INPP5EQ9NRR6 644 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 TAS2R16Q9NYV7 291 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 MRM2Q9UI43 246 aaKnown RBP5.19□□□□□ -1.58
USP39-213ENST00000467885 KCNG2Q9UJ96 466 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 GDF2Q9UK05 429 aaPredicted RBP5.19□□□□□ -1.58
USP39-213ENST00000467885 CAB39Q9Y376 341 aaPredicted RBP5.19□□□□□ -1.58
USP39-213ENST00000467885 SIRT4Q9Y6E7 314 aaPredicted RBP5.19□□□□□ -1.58
USP39-213ENST00000467885 SVILO95425 2214 aa5.19□□□□□ -1.58
USP39-213ENST00000467885 SHANK1Q9Y566 2161 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms