RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 OR6C68A6NDL8 312 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 RIIAD1A6NNX1 92 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 J3QW42 95 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 OR4A8P0C604 315 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 PATE4P0C8F1 98 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 STOMP27105 288 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 SERPINF1P36955 418 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 RAD52P43351 418 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 BLVRAP53004 296 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 SLC25A1P53007 311 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 PSG4Q00888 419 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 KRT80Q6KB66 452 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 FAHD1Q6P587 224 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 KRTAP1-3Q8IUG1 177 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 OR6V1Q8N148 313 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 ATG16L2Q8NAA4 619 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 SLC26A10Q8NG04 563 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 OR10H5Q8NGA6 315 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 MRPL24Q96A35 216 aaKnown RBP10.24□□□□□ -0.77
VPS52-213ENST00000461743 DDOQ99489 341 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 RBM4Q9BWF3 364 aaKnown RBP10.24□□□□□ -0.77
VPS52-213ENST00000461743 CACNG6Q9BXT2 260 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 TEX12Q9BXU0 123 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 HDHD2Q9H0R4 259 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 WNT5BQ9H1J7 359 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 PLK3Q9H4B4 646 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 SLC25A19Q9HC21 320 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 EMC7Q9NPA0 242 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 POLR1DQ9Y2S0 133 aa10.24□□□□□ -0.77
VPS52-213ENST00000461743 DCTN6O00399 190 aa10.23□□□□□ -0.77
VPS52-213ENST00000461743 SGCEO43556 437 aa10.23□□□□□ -0.77
VPS52-213ENST00000461743 DOK2O60496 412 aa10.23□□□□□ -0.77
VPS52-213ENST00000461743 PAICSP22234 425 aaKnown RBP10.23□□□□□ -0.77
VPS52-213ENST00000461743 TUBG1P23258 451 aa10.23□□□□□ -0.77
VPS52-213ENST00000461743 APEX1P27695 318 aaKnown RBP10.23□□□□□ -0.77
VPS52-213ENST00000461743 THBS4P35443 961 aa10.23□□□□□ -0.77
VPS52-213ENST00000461743 CDKN1AP38936 164 aa10.23□□□□□ -0.77
VPS52-213ENST00000461743 GDI2P50395 445 aaKnown RBP10.23□□□□□ -0.77
VPS52-213ENST00000461743 ERFP50548 548 aa10.23□□□□□ -0.77
VPS52-213ENST00000461743 ADAM8P78325 824 aa10.23□□□□□ -0.77
VPS52-213ENST00000461743 RAB35Q15286 201 aa10.23□□□□□ -0.77
VPS52-213ENST00000461743 ARL9Q6T311 187 aa10.23□□□□□ -0.77
VPS52-213ENST00000461743 ZDHHC13Q8IUH4 622 aa10.23□□□□□ -0.77
VPS52-213ENST00000461743 SLC37A3Q8NCC5 494 aa10.23□□□□□ -0.77
VPS52-213ENST00000461743 CPEB3Q8NE35 698 aaKnown RBP10.23□□□□□ -0.77
VPS52-213ENST00000461743 PROKR2Q8NFJ6 384 aa10.23□□□□□ -0.77
VPS52-213ENST00000461743 GJC3Q8NFK1 279 aa10.23□□□□□ -0.77
VPS52-213ENST00000461743 OR4Q3Q8NH05 313 aa10.23□□□□□ -0.77
VPS52-213ENST00000461743 C11orf40Q8WZ69 217 aa10.23□□□□□ -0.77
VPS52-213ENST00000461743 CENPNQ96H22 339 aaPredicted RBP10.23□□□□□ -0.77
VPS52-213ENST00000461743 POM121L2Q96KW2 1035 aa10.23□□□□□ -0.77
VPS52-213ENST00000461743 TSSK2Q96PF2 358 aa10.23□□□□□ -0.77
VPS52-213ENST00000461743 NR1H4Q96RI1 486 aaPredicted RBP10.23□□□□□ -0.77
VPS52-213ENST00000461743 DCLRE1CQ96SD1 692 aaKnown RBP10.23□□□□□ -0.77
VPS52-213ENST00000461743 COQ7Q99807 217 aa10.23□□□□□ -0.77
VPS52-213ENST00000461743 PRRG3Q9BZD7 231 aa10.23□□□□□ -0.77
VPS52-213ENST00000461743 NMNAT2Q9BZQ4 307 aa10.23□□□□□ -0.77
VPS52-213ENST00000461743 RERGLQ9H628 205 aa10.23□□□□□ -0.77
VPS52-213ENST00000461743 ELOVL3Q9HB03 270 aa10.23□□□□□ -0.77
VPS52-213ENST00000461743 TUBG2Q9NRH3 451 aa10.23□□□□□ -0.77
VPS52-213ENST00000461743 ASH2LQ9UBL3 628 aa10.23□□□□□ -0.77
VPS52-213ENST00000461743 ZANQ9Y493 2812 aa10.23□□□□□ -0.77
VPS52-213ENST00000461743 YLPM1P49750 1951 aaKnown RBP10.23□□□□□ -0.77
VPS52-213ENST00000461743 OR6C6A6NF89 314 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 G3V2T6 193 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 SYNGR3O43761 229 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 HMGN1P05114 100 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 SCG5P05408 212 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 ERCC1P07992 297 aaPredicted RBP10.22□□□□□ -0.77
VPS52-213ENST00000461743 CSF3P09919 207 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 FOSL1P15407 271 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 ZNF23P17027 643 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 HTR5AP47898 357 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 ESRRGP62508 458 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 HIST1H3AP68431 136 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 TEKQ02763 1124 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 CRMP1Q14194 572 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 KPNB1Q14974 876 aaKnown RBP10.22□□□□□ -0.77
VPS52-213ENST00000461743 ZNF362Q5T0B9 420 aaPredicted RBP10.22□□□□□ -0.77
VPS52-213ENST00000461743 SLC35F1Q5T1Q4 408 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 HIST2H3PS2Q5TEC6 136 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 RGS7BPQ6MZT1 257 aaPredicted RBP10.22□□□□□ -0.77
VPS52-213ENST00000461743 ZNF774Q6NX45 483 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 VHLLQ6RSH7 139 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 UGT2A3Q6UWM9 527 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 HIST2H3AQ71DI3 136 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 VASH1Q7L8A9 365 aaPredicted RBP10.22□□□□□ -0.77
VPS52-213ENST00000461743 HS3ST5Q8IZT8 346 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 AKR7LQ8NHP1 331 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 FAM81AQ8TBF8 368 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 COG8Q96MW5 612 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 VCX3BQ9H321 246 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 VCX3AQ9NNX9 186 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 MYOZ1Q9NP98 299 aaPredicted RBP10.22□□□□□ -0.77
VPS52-213ENST00000461743 KRT84Q9NSB2 600 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 PLEK2Q9NYT0 353 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 EIF3KQ9UBQ5 218 aaKnown RBP10.22□□□□□ -0.77
VPS52-213ENST00000461743 LHFPL6Q9Y693 200 aa10.22□□□□□ -0.77
VPS52-213ENST00000461743 IGLV3-9A0A075B6K5 115 aa10.21□□□□□ -0.77
VPS52-213ENST00000461743 LOC100509620A0A075B734 347 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms