RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 EID2Q8N6I1 236 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 FAM86B1Q8N7N1 296 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 B3GNT7Q8NFL0 401 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 IPMKQ8NFU5 416 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 OR6C4Q8NGE1 309 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 OR5B17Q8NGF7 314 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 COQ8AQ8NI60 647 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 RAET1EQ8TD07 263 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 GATAD1Q8WUU5 269 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 ARL11Q969Q4 196 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 ZBED6CLQ96FA7 236 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 MRPL48Q96GC5 212 aaKnown RBP3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 CDKN2AIPNLQ96HQ2 116 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 CELF6Q96J87 481 aaKnown RBP3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 LRR1Q96L50 414 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 LURAP1Q96LR2 239 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 ZNF599Q96NL3 588 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 PIGQQ9BRB3 760 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 DPH7Q9BTV6 452 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 FICDQ9BVA6 458 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 DERL2Q9GZP9 239 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 DEFB129Q9H1M3 183 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 C20orf85Q9H1P6 137 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 PORCNQ9H237 461 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 REEP4Q9H6H4 257 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 EGLN3Q9H6Z9 239 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 TXNL4BQ9NX01 149 aaKnown RBP3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 RNF186Q9NXI6 227 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 MS4A12Q9NXJ0 267 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 TAS2R3Q9NYW6 316 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 TREM2Q9NZC2 230 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 METTL1Q9UBP6 276 aaKnown RBP3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 MUTYHQ9UIF7 546 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 FBXL4Q9UKA2 621 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 PILRBQ9UKJ0 227 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 EXOSC1Q9Y3B2 195 aaKnown RBP3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 UBIAD1Q9Y5Z9 338 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 SYNJ2BP-COX16A0A087WUM0 186 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 A0A1B0GWJ7 208 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 A0A1W2PRV1 198 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 ANTXRLA6NF34 631 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 C19orf81C9J6K1 198 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 C9JVG2 144 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 E5RGE8 158 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 TLR4O00206 839 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 UBFD1O14562 309 aaKnown RBP3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 SLC31A2O15432 143 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 HPGDSO60760 199 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 NME6O75414 186 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 CLN5O75503 358 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 GPX5O75715 221 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 GRAP2O75791 330 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 EIF3GO75821 320 aaKnown RBP eCLIP3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 GADD45GO95257 159 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 MPC2O95563 127 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 POP4O95707 220 aaKnown RBP3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 MBP02144 154 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 PRPS2P11908 318 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 RPA2P15927 270 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 DPEP1P16444 411 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 ZNF14P17017 642 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 RPL35AP18077 110 aaKnown RBP3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 PRKACGP22612 351 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 NFYAP23511 347 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 ATP5A1P25705 553 aaKnown RBP3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 HOXA9P31269 272 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 FGF9P31371 208 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 S100A3P33764 101 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 ATP5C1P36542 298 aaKnown RBP3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 SPAM1P38567 509 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 SOX3P41225 446 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 PITPNBP48739 271 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 RGS4P49798 205 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 ARFIP1P53367 373 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 CTBP2P56545 445 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 VSX2P58304 361 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 SNRPGP62308 76 aaKnown RBP3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 EIF5AP63241 154 aaKnown RBP3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 MRPS10P82664 201 aaKnown RBP3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 SP3Q02447 781 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 MXD1Q05195 221 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 SLC3A1Q07837 685 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 C2orf80Q0P641 193 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 ECH1Q13011 328 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 BIKQ13323 160 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 GPR176Q14439 515 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 HEPACAMQ14CZ8 416 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 PPA1Q15181 289 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 HMGN3Q15651 99 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 SSX1Q16384 188 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 ZNF239Q16600 458 aaKnown RBP3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 ZSWIM7Q19AV6 140 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 C2orf76Q3KRA6 126 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 KRTAP24-1Q3LI83 254 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 ZNF528Q3MIS6 628 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 SLC25A52Q3SY17 297 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 LGALSLQ3ZCW2 172 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 IFI44LQ53G44 452 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 IDNKQ5T6J7 187 aa3.81□□□□□ -1.8
HMGB1P16-201ENST00000447155 ZNF772Q68DY9 489 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms