RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 HORMAD1Q86X24 394 aa4.01□□□□□ -1.77
TM9SF3-202ENST00000443638 CDKL3Q8IVW4 592 aaPredicted RBP4.01□□□□□ -1.77
TM9SF3-202ENST00000443638 MREGQ8N565 214 aa4.01□□□□□ -1.77
TM9SF3-202ENST00000443638 WDR31Q8NA23 367 aa4.01□□□□□ -1.77
TM9SF3-202ENST00000443638 OR51A7Q8NH64 312 aa4.01□□□□□ -1.77
TM9SF3-202ENST00000443638 UBA3Q8TBC4 463 aa4.01□□□□□ -1.77
TM9SF3-202ENST00000443638 C18orf12Q96KH6 178 aa4.01□□□□□ -1.77
TM9SF3-202ENST00000443638 ALS2CR12Q96Q35 445 aa4.01□□□□□ -1.77
TM9SF3-202ENST00000443638 SH3GL3Q99963 347 aa4.01□□□□□ -1.77
TM9SF3-202ENST00000443638 WACQ9BTA9 647 aa4.01□□□□□ -1.77
TM9SF3-202ENST00000443638 C19orf24Q9BVV8 132 aa4.01□□□□□ -1.77
TM9SF3-202ENST00000443638 POTEKPQ9BYX7 375 aa4.01□□□□□ -1.77
TM9SF3-202ENST00000443638 SRRQ9GZT4 340 aa4.01□□□□□ -1.77
TM9SF3-202ENST00000443638 DEFB127Q9H1M4 99 aa4.01□□□□□ -1.77
TM9SF3-202ENST00000443638 HEXA-AS1Q9H8Q6 139 aa4.01□□□□□ -1.77
TM9SF3-202ENST00000443638 UCK1Q9HA47 277 aa4.01□□□□□ -1.77
TM9SF3-202ENST00000443638 IMP3Q9NV31 184 aaKnown RBP4.01□□□□□ -1.77
TM9SF3-202ENST00000443638 BTNL2Q9UIR0 455 aa4.01□□□□□ -1.77
TM9SF3-202ENST00000443638 KLHL21Q9UJP4 597 aa4.01□□□□□ -1.77
TM9SF3-202ENST00000443638 PSMD13Q9UNM6 376 aa4.01□□□□□ -1.77
TM9SF3-202ENST00000443638 USP42Q9H9J4 1324 aaKnown RBP4□□□□□ -1.77
TM9SF3-202ENST00000443638 A0A1B0GVI7 797 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 SHISA9B4DS77 424 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 KLRC4-KLRK1H3BQV0 150 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 AGPAT2O15120 278 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 ZNF780AO75290 641 aaPredicted RBP4□□□□□ -1.77
TM9SF3-202ENST00000443638 LYPLA1O75608 230 aaPredicted RBP4□□□□□ -1.77
TM9SF3-202ENST00000443638 LDOC1O95751 146 aaPredicted RBP4□□□□□ -1.77
TM9SF3-202ENST00000443638 HPRT1P00492 218 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 HPNP05981 417 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 NEFHP12036 1026 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 NTSP30990 170 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 KDELR2P33947 212 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 BTCP35070 178 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 UGT2B10P36537 528 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 RND2P52198 227 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 APOC4P55056 127 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 TAS2R60P59551 318 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 SELENOTP62341 195 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 RPL31P62899 125 aaKnown RBP4□□□□□ -1.77
TM9SF3-202ENST00000443638 PAX8Q06710 450 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 CD47Q08722 323 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 ELAVL2Q12926 359 aaKnown RBP4□□□□□ -1.77
TM9SF3-202ENST00000443638 ASAH1Q13510 395 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 CLINT1Q14677 625 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 OR4D1Q15615 310 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 C2orf66Q6UXQ4 117 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 ZNF620Q6ZNG0 422 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 PEX26Q7Z412 305 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 NAXDQ8IW45 347 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 RNF10Q8N5U6 811 aaKnown RBP4□□□□□ -1.77
TM9SF3-202ENST00000443638 Q8N9P0 234 aaPredicted RBP4□□□□□ -1.77
TM9SF3-202ENST00000443638 LRRC45Q96CN5 670 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 ZFP3Q96NJ6 502 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 ZNF184Q99676 751 aaPredicted RBP4□□□□□ -1.77
TM9SF3-202ENST00000443638 GPR21Q99679 349 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 ZNF251Q9BRH9 671 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 TIMM29Q9BSF4 260 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 HES7Q9BYE0 225 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 TRIM15Q9C019 465 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 PLEKHA1Q9HB21 404 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 SDHAF3Q9NRP4 125 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 SLC25A37Q9NYZ2 338 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 VAPAQ9P0L0 249 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 ST3GAL6Q9Y274 331 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 VSIG4Q9Y279 399 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 FHOD3Q2V2M9 1422 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 ADCY9O60503 1353 aa4□□□□□ -1.77
TM9SF3-202ENST00000443638 RAD50Q92878 1312 aa3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 MAPK8IP3Q9UPT6 1336 aa3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 PHF3Q92576 2039 aaKnown RBP3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 TRAV39A0A0B4J263 110 aa3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 M0QXV9 152 aa3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 GABRPO00591 440 aa3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 PLPP3O14495 311 aa3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 SGCEO43556 437 aa3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 AIFM1O95831 613 aa3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 C6orf47O95873 294 aa3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 TRIM49P0CI25 452 aa3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 TRIM49CP0CI26 452 aa3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 SMIM10L1P0DMW3 83 aa3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 PGAM2P15259 253 aa3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 ZP3P21754 424 aa3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 USF1P22415 310 aaPredicted RBP3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 VDAC2P45880 294 aaPredicted RBP3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 ZNF121P58317 390 aaPredicted RBP3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 PAFAH1B2P68402 229 aa3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 TWF1Q12792 350 aa3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 DYNC1I2Q13409 638 aaKnown RBP3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 CDKL4Q5MAI5 379 aa3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 CPTPQ5TA50 214 aa3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 FRMPD2BQ6IN97 320 aa3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 RWDD4Q6NW29 188 aaKnown RBP3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 TPGS1Q6ZTW0 290 aa3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 ABHD13Q7L211 337 aa3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 FAM220AQ7Z4H9 259 aa3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 FAM19A1Q7Z5A9 133 aa3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 SETD3Q86TU7 594 aaPredicted RBP3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 PLCZ1Q86YW0 608 aa3.99□□□□□ -1.77
TM9SF3-202ENST00000443638 HIPK1Q86Z02 1210 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms