RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 ERVK-18Q9QC07 812 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 RHCGQ9UBD6 479 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 SEC14L3Q9UDX4 400 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 OR14J1Q9UGF5 321 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 KLK4Q9Y5K2 254 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 BSNQ9UPA5 3926 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 CHD6Q8TD26 2715 aa4.08□□□□□ -1.76
SF3B1-202ENST00000409915 KALRNO60229 2985 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 IGSF10Q6WRI0 2623 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 A0A0G2JN53 185 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 A0A1B0GTL3 188 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 A0A1B0GV90 55 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 A0A1B0GX78 115 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 ATP6AP2A0A1C7CYW4 349 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 HYKKA2RU49 373 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 OR14I1A6ND48 311 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 RFPL4AA6NLU0 287 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 A8MT66 165 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 C9J4A7 227 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 RFPL4AL1F8VTS6 287 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 K7ENP7 123 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 PRYO14603 147 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 ITGB1BP1O14713 200 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 XRCC3O43542 346 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 FOXS1O43638 330 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 OR1F1O43749 312 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 PRKYO43930 277 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 SSX4O60224 188 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 ALOX12BO75342 701 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 RDH16O75452 317 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 STK16O75716 305 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 ZFPL1O95159 310 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 GPANK1O95872 356 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 HPRP00739 348 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 CSN3P07498 182 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 OR4E1P0C645 316 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 LINC00614P0C842 121 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 UMPSP11172 480 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 IFI30P13284 250 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 CD36P16671 472 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 TUBG1P23258 451 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 OR3A1P47881 315 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 ERFP50548 548 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 NUDT6P53370 316 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 UCNP55089 124 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 KCNK10P57789 538 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 CXCR4P61073 352 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 RPS15AP62244 130 aaKnown RBP4.07□□□□□ -1.76
SF3B1-202ENST00000409915 SNRPEP62304 92 aaKnown RBP4.07□□□□□ -1.76
SF3B1-202ENST00000409915 HERVK_113P63132 956 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 DCDP81605 110 aaKnown RBP4.07□□□□□ -1.76
SF3B1-202ENST00000409915 GLO1Q04760 184 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 PUDPQ08623 228 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 FUT7Q11130 342 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 ECH1Q13011 328 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 GAGE1Q13065 139 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 SLAMF1Q13291 335 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 MELKQ14680 651 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 C2orf68Q2NKX9 166 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 DEFB109BQ30KR1 87 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 PAN3Q58A45 887 aaKnown RBP4.07□□□□□ -1.76
SF3B1-202ENST00000409915 XKR6Q5GH73 641 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 MTX3Q5HYI7 312 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 OR2B11Q5JQS5 317 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 PDZK1Q5T2W1 519 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 LIPJQ5W064 366 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 ASPHD2Q6ICH7 369 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 C8orf82Q6P1X6 216 aaPredicted RBP4.07□□□□□ -1.76
SF3B1-202ENST00000409915 FAM159AQ6UWV7 190 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 TIFABQ6ZNK6 161 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 SHFQ7M4L6 423 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 GOLGA7Q7Z5G4 137 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 YRDCQ86U90 279 aaKnown RBP4.07□□□□□ -1.76
SF3B1-202ENST00000409915 DTX2Q86UW9 622 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 P2RY8Q86VZ1 359 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 GID4Q8IVV7 300 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 SKA3Q8IX90 412 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 STX19Q8N4C7 294 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 LRRC17Q8N6Y2 441 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 MFSD9Q8NBP5 474 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 FAM83FQ8NEG4 500 aaPredicted RBP4.07□□□□□ -1.76
SF3B1-202ENST00000409915 DUSP18Q8NEJ0 188 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 OR4N2Q8NGD1 307 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 OR9A4Q8NGU2 314 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 OR2AJ1Q8NGZ0 328 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 OR10J5Q8NHC4 309 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 RHEBL1Q8TAI7 183 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 PROKR1Q8TCW9 393 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 GLYATL2Q8WU03 294 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 UBTD2Q8WUN7 234 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 GGHQ92820 318 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 EXTL1Q92935 676 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 RERGQ96A58 199 aaPredicted RBP4.07□□□□□ -1.76
SF3B1-202ENST00000409915 EXOSC8Q96B26 276 aaKnown RBP4.07□□□□□ -1.76
SF3B1-202ENST00000409915 HAVCR1Q96D42 359 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 C14orf144Q96I85 54 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 ZNF48Q96MX3 618 aaPredicted RBP4.07□□□□□ -1.76
SF3B1-202ENST00000409915 RILPQ96NA2 401 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 AIF1LQ9BQI0 150 aa4.07□□□□□ -1.76
SF3B1-202ENST00000409915 PDCD10Q9BUL8 212 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms