RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 ELK1P19419 428 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 TBXA2RP21731 343 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 STOMP27105 288 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 UQCRC1P31930 480 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 TGM4P49221 684 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 LHX2P50458 406 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 SRYQ05066 204 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 GGTLC2Q14390 218 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 ACSM3Q53FZ2 586 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 KLHL12Q53G59 568 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 MRPL2Q5T653 305 aaKnown RBP9.25□□□□□ -0.93
COL5A1-202ENST00000371820 DMKNQ6E0U4 476 aaPredicted RBP9.25□□□□□ -0.93
COL5A1-202ENST00000371820 OR2A2Q6IF42 318 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 SFXN4Q6P4A7 337 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 ARSKQ6UWY0 536 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 DPY19L2P2Q6ZN68 376 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 P4HA3Q7Z4N8 544 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 COMTD1Q86VU5 262 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 TOMM5Q8N4H5 51 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 YIPF7Q8N8F6 280 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 ZNF527Q8NB42 609 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 RELL2Q8NC24 303 aaPredicted RBP9.25□□□□□ -0.93
COL5A1-202ENST00000371820 OR10H4Q8NGA5 316 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 DUSP19Q8WTR2 217 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 SMPDL3BQ92485 455 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 RNASE6Q93091 150 aaKnown RBP9.25□□□□□ -0.93
COL5A1-202ENST00000371820 WNT2BQ93097 391 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 ZG16BQ96DA0 208 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 WACQ9BTA9 647 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 SFXN3Q9BWM7 321 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 SLITRK2Q9H156 845 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 RERGLQ9H628 205 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 RANGRFQ9HD47 186 aaPredicted RBP9.25□□□□□ -0.93
COL5A1-202ENST00000371820 UBQLN4Q9NRR5 601 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 MCUBQ9NWR8 336 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 NLKQ9UBE8 527 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 SPATA2Q9UM82 520 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 RPH3AQ9Y2J0 694 aaPredicted RBP9.25□□□□□ -0.93
COL5A1-202ENST00000371820 RBMX2Q9Y388 322 aaKnown RBP9.25□□□□□ -0.93
COL5A1-202ENST00000371820 CHST2Q9Y4C5 530 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 ALG5Q9Y673 324 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 CACNG2Q9Y698 323 aa9.25□□□□□ -0.93
COL5A1-202ENST00000371820 ZFHX3Q15911 3703 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 A0A0B4J2E0 115 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 A0A1B0GX12 115 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 A0A1W2PQD3 144 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 J3QLW9 94 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 PHYHO14832 338 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 HCRTR2O43614 444 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 ZIC3O60481 467 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 SC5DO75845 299 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 CRHP06850 196 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 CD8BP10966 210 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 PNMTP11086 282 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 ZNF17P17021 662 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 ZNF19P17023 458 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 TCEA1P23193 301 aaKnown RBP9.24□□□□□ -0.93
COL5A1-202ENST00000371820 MAPK3P27361 379 aaPredicted RBP9.24□□□□□ -0.93
COL5A1-202ENST00000371820 CLDN18P56856 261 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 IKZF1Q13422 519 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 ZNF141Q15928 474 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 FIGNL1Q6PIW4 674 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 UNQ9370/PRO34162Q6UXP9 181 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 LINC00114Q6XXX2 140 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 MARCH3Q86UD3 253 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 NAXEQ8NCW5 288 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 C17orf50Q8WW18 174 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 RAB40AQ8WXH6 277 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 PTP4A1Q93096 173 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 SGTBQ96EQ0 304 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 MED30Q96HR3 178 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 RNF170Q96K19 258 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 QRSL1Q9H0R6 528 aaKnown RBP9.24□□□□□ -0.93
COL5A1-202ENST00000371820 ABCG5Q9H222 651 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 PIGMQ9H3S5 423 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 B3GNT2Q9NY97 397 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 FLRT3Q9NZU0 649 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 MED11Q9P086 117 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 CLCF1Q9UBD9 225 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 ICAM5Q9UMF0 924 aa9.24□□□□□ -0.93
COL5A1-202ENST00000371820 C7orf66A4D0T2 115 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 ANKRD34BA5PLL1 514 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 EEF1E1-BLOC1S5C9J1V9 151 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 EEF1E1O43324 174 aaKnown RBP9.23□□□□□ -0.93
COL5A1-202ENST00000371820 FRS3O43559 492 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 GOSR1O95249 250 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 LYPD3O95274 346 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 LALBAP00709 142 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 IGKV1D-16P01601 117 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 THY1P04216 161 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 FCGR2AP12318 317 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 MAKP20794 623 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 SLC2A5P22732 501 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 SHC1P29353 583 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 STARP49675 285 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 ZNF41P51814 821 aaPredicted RBP9.23□□□□□ -0.93
COL5A1-202ENST00000371820 NKX2-5P52952 324 aaPredicted RBP9.23□□□□□ -0.93
COL5A1-202ENST00000371820 SLC16A1P53985 500 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 SIRPAP78324 504 aa9.23□□□□□ -0.93
COL5A1-202ENST00000371820 SORDQ00796 357 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms