RNA–Protein interactions for RNA: ENST00000363016.1

RNU6-249P-201, Transcript of RNA, U6 small nuclear 249, pseudogene, humanhuman

BASIC

Gene RNU6-249P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-249P-201ENST00000363016 CD160O95971 181 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 HLA-DQA2P01906 255 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 SLC35G4P0C7Q5 338 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 LIMS3P0CW19 117 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 LIMS4P0CW20 117 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 SULT1A3P0DMM9 295 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 SULT1A4P0DMN0 295 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 ZNF30P17039 623 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 ENGP17813 658 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 DUSP1P28562 367 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 NR4A2P43354 598 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 MAGEA5P43359 124 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 RPL21P46778 160 aaKnown RBP4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 LGALS7P47929 136 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 TDGF1P3P51864 188 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 TPI1P60174 286 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 DUSP2Q05923 314 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 RGS1Q08116 209 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 CD47Q08722 323 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 MYBPHQ13203 477 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 MAD2L1Q13257 205 aaPredicted RBP4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 MFAP5Q13361 173 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 ZNF846Q147U1 533 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 NFATC4Q14934 902 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 KIR2DS3Q14952 304 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 NEDD8Q15843 81 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 ZIC1Q15915 447 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 OCIAD2Q56VL3 154 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 OR10J3Q5JRS4 329 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 AVPI1Q5T686 147 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 FAM102AQ5T9C2 384 aaPredicted RBP4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 AWAT2Q6E213 333 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 GLYATQ6IB77 296 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 CDC42EP5Q6NZY7 148 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 ZNF613Q6PF04 617 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 SLC23A3Q6PIS1 610 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 TEX261Q6UWH6 196 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 CASP12Q6UXS9 341 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 ZNF782Q6ZMW2 699 aaPredicted RBP4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 MBOAT2Q6ZWT7 520 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 LARP4Q71RC2 724 aaKnown RBP eCLIP4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 SPRED2Q7Z698 418 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 LDLRAD3Q86YD5 345 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 DOLPP1Q86YN1 238 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 C16orf71Q8IYS4 520 aaPredicted RBP4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 SPEM1Q8N4L4 309 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 DHRSXQ8N5I4 330 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 NFAM1Q8NET5 270 aaPredicted RBP4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 OR52E4Q8NGH9 312 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 PLPPR1Q8TBJ4 325 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 HAVCR2Q8TDQ0 301 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 SMAP2Q8WU79 429 aaPredicted RBP4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 ORAOV1Q8WV07 137 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 TMEM170AQ8WVE7 144 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 ACOT12Q8WYK0 555 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 ATG4AQ8WYN0 398 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 OR8D1Q8WZ84 308 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 SNAPC3Q92966 411 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 TOMM40LQ969M1 308 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 ACDQ96AP0 544 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 FBXL8Q96CD0 374 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 TM4SF18Q96CE8 201 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 RNF183Q96D59 192 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 PNKPQ96T60 521 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 SULT4A1Q9BR01 284 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 C1orf50Q9BV19 199 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 NXF5Q9H1B4 397 aaKnown RBP4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 MAP1LC3AQ9H492 121 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 CDCP1Q9H5V8 836 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 MAGIXQ9H6Y5 334 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 AMBNQ9NP70 447 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 SLC7A10Q9NS82 523 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 TMEM74BQ9NUR3 256 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 DCAF13Q9NV06 445 aaKnown RBP4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 MRPS18AQ9NVS2 196 aaKnown RBP4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 FAM206AQ9NX38 181 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 IL36GQ9NZH8 169 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 ARMCX1Q9P291 453 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 SS18L2Q9UHA2 77 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 CDC42EP3Q9UKI2 254 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 SNX12Q9UMY4 172 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 SIGLEC9Q9Y336 463 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 RPL36Q9Y3U8 105 aaKnown RBP4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 LSM5Q9Y4Y9 91 aaKnown RBP4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 CHD5Q8TDI0 1954 aa4.7□□□□□ -1.66
RNU6-249P-201ENST00000363016 KIF1BO60333 1816 aa4.69□□□□□ -1.66
RNU6-249P-201ENST00000363016 POLA1P09884 1462 aaPredicted RBP4.69□□□□□ -1.66
RNU6-249P-201ENST00000363016 TMEM2Q9UHN6 1383 aa4.69□□□□□ -1.66
RNU6-249P-201ENST00000363016 A0A0B4J2E0 115 aa4.69□□□□□ -1.66
RNU6-249P-201ENST00000363016 A0A1B0GUS0 222 aa4.69□□□□□ -1.66
RNU6-249P-201ENST00000363016 TINCRA0A1B0GVN0 87 aa4.69□□□□□ -1.66
RNU6-249P-201ENST00000363016 A0A1B0GX12 115 aa4.69□□□□□ -1.66
RNU6-249P-201ENST00000363016 ANKRD20A5PA0PJZ0 165 aa4.69□□□□□ -1.66
RNU6-249P-201ENST00000363016 ANTXRLA6NF34 631 aa4.69□□□□□ -1.66
RNU6-249P-201ENST00000363016 CXorf49A8MYA2 514 aaPredicted RBP4.69□□□□□ -1.66
RNU6-249P-201ENST00000363016 E9PLN8 166 aa4.69□□□□□ -1.66
RNU6-249P-201ENST00000363016 H0YL77 283 aa4.69□□□□□ -1.66
RNU6-249P-201ENST00000363016 WDR1O75083 606 aa4.69□□□□□ -1.66
RNU6-249P-201ENST00000363016 ZNF780AO75290 641 aaPredicted RBP4.69□□□□□ -1.66
RNU6-249P-201ENST00000363016 ATP6AP2O75787 350 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms