RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 YDJCA8MPS7 323 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 KCNQ2O43526 872 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 USP2O75604 605 aaPredicted RBP4.47□□□□□ -1.69
CSMD3-201ENST00000297405 MT-ATP6P00846 226 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 YBX1P67809 324 aaKnown RBP4.47□□□□□ -1.69
CSMD3-201ENST00000297405 CEACAM7Q14002 265 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 NKPD1Q17RQ9 610 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 WBP2NLQ6ICG8 309 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 TFAP2EQ6VUC0 442 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 FJX1Q86VR8 437 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 SLC5A8Q8N695 610 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 OIT3Q8WWZ8 545 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 ALX4Q9H161 411 aaPredicted RBP4.47□□□□□ -1.69
CSMD3-201ENST00000297405 FZD1Q9UP38 647 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 PRR36Q9H6K5 1346 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 MRC1P22897 1456 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 M0R296 226 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 CELF2O95319 508 aaKnown RBP4.47□□□□□ -1.69
CSMD3-201ENST00000297405 CSF2RBP32927 897 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 NKX2-1P43699 371 aaPredicted RBP4.47□□□□□ -1.69
CSMD3-201ENST00000297405 JAG1P78504 1218 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 IL10RAQ13651 578 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 Q1RN00 199 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 C11orf87Q6NUJ2 197 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 LYG2Q86SG7 212 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 DUSP18Q8NEJ0 188 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 SLC25A33Q9BSK2 321 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 NKX2-4Q9H2Z4 354 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 EGLN3Q9H6Z9 239 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 GPATCH2LQ9NWQ4 482 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 WIPI2Q9Y4P8 454 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 C1orf167Q5SNV9 1468 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 SLC35E2BP0CK96 405 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 FBLN1P23142 703 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 VASPP50552 380 aaPredicted RBP4.47□□□□□ -1.69
CSMD3-201ENST00000297405 NHLH1Q02575 133 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 ZNF600Q6ZNG1 722 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 SYS1Q8N2H4 156 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 C4orf36Q96KX1 117 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 RAB6CQ9H0N0 254 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 OCEL1Q9H607 264 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 CYSLTR2Q9NS75 346 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 CHST2Q9Y4C5 530 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 C19orf67A6NJJ6 358 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 DRGXA6NNA5 263 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 ERI3O43414 337 aaKnown RBP4.47□□□□□ -1.69
CSMD3-201ENST00000297405 TAL1P17542 331 aaPredicted RBP4.47□□□□□ -1.69
CSMD3-201ENST00000297405 EPHA8P29322 1005 aaPredicted RBP4.47□□□□□ -1.69
CSMD3-201ENST00000297405 CEBPAP49715 358 aaPredicted RBP4.47□□□□□ -1.69
CSMD3-201ENST00000297405 OR4F3Q6IEY1 312 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 CPA6Q8N4T0 437 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 UBTD2Q8WUN7 234 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 RNF2Q99496 336 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 HSD3B7Q9H2F3 369 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 UQCC1Q9NVA1 299 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 RABAC1Q9UI14 185 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 NDRG4Q9ULP0 352 aaKnown RBP4.47□□□□□ -1.69
CSMD3-201ENST00000297405 GPR45Q9Y5Y3 372 aa4.47□□□□□ -1.69
CSMD3-201ENST00000297405 TMEM225BP0DP42 221 aa4.46□□□□□ -1.69
CSMD3-201ENST00000297405 DGKEP52429 567 aa4.46□□□□□ -1.69
CSMD3-201ENST00000297405 DOK7Q18PE1 504 aa4.46□□□□□ -1.69
CSMD3-201ENST00000297405 PLBD1Q6P4A8 553 aa4.46□□□□□ -1.69
CSMD3-201ENST00000297405 VGLL2Q8N8G2 317 aa4.46□□□□□ -1.69
CSMD3-201ENST00000297405 NUP43Q8NFH3 380 aa4.46□□□□□ -1.69
CSMD3-201ENST00000297405 OR10J5Q8NHC4 309 aa4.46□□□□□ -1.69
CSMD3-201ENST00000297405 ZNF689Q96CS4 500 aaPredicted RBP4.46□□□□□ -1.69
CSMD3-201ENST00000297405 MRPL13Q9BYD1 178 aaKnown RBP4.46□□□□□ -1.69
CSMD3-201ENST00000297405 NMUR1Q9HB89 426 aa4.46□□□□□ -1.69
CSMD3-201ENST00000297405 LRRK2Q5S007 2527 aa4.46□□□□□ -1.69
CSMD3-201ENST00000297405 GPR37L1O60883 481 aa4.46□□□□□ -1.69
CSMD3-201ENST00000297405 VAMP5O95183 116 aa4.46□□□□□ -1.69
CSMD3-201ENST00000297405 STBD1O95210 358 aa4.46□□□□□ -1.69
CSMD3-201ENST00000297405 C6orf47O95873 294 aa4.46□□□□□ -1.69
CSMD3-201ENST00000297405 OR2AK2Q8NG84 335 aa4.46□□□□□ -1.69
CSMD3-201ENST00000297405 MRPS24Q96EL2 167 aaKnown RBP4.46□□□□□ -1.69
CSMD3-201ENST00000297405 MRPL17Q9NRX2 175 aaKnown RBP4.46□□□□□ -1.69
CSMD3-201ENST00000297405 DMAC2Q9NW81 257 aa4.46□□□□□ -1.69
CSMD3-201ENST00000297405 FBXL2Q9UKC9 423 aa4.46□□□□□ -1.69
CSMD3-201ENST00000297405 A0A1W2PN81 502 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 CHRNA7P36544 502 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 UQCRFS1P47985 274 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 ZNF124Q15973 351 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 CT83Q5H943 113 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 PRAMEF19Q5SWL8 479 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 NKAIN2Q5VXU1 208 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 SAXO2Q658L1 398 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 CCDC190Q86UF4 302 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 NIT1Q86X76 327 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 LINC00518Q8N0U6 118 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 RBMXL3Q8N7X1 1067 aaKnown RBP4.46□□□□□ -1.7
CSMD3-201ENST00000297405 OR52E2Q8NGJ4 325 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 PPP1R1CQ8WVI7 109 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 RHCGQ9UBD6 479 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 CH25HO95992 272 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 OR12D1P0DN82 309 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 HOXA6P31267 233 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 PPP2CAP67775 309 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 CD226Q15762 336 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 CCL15Q16663 113 aa4.46□□□□□ -1.7
CSMD3-201ENST00000297405 MPV17LQ2QL34 196 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms