RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 MROH1Q8NDA8 1641 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 RAB5AP20339 215 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 HBA1P69905 142 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 DGAT2L6Q6ZPD8 337 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 HSD17B13Q7Z5P4 300 aaPredicted RBP10.45□□□□□ -0.74
PTPN4-201ENST00000263708 PRSS35Q8N3Z0 413 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 TSLPQ969D9 159 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 CCSO14618 274 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 TGOLN2O43493 480 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 FGF4P08620 206 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 BMP2P12643 396 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 PARS2Q7L3T8 475 aaKnown RBP10.45□□□□□ -0.74
PTPN4-201ENST00000263708 TMIGD2Q96BF3 282 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 PKMYT1Q99640 499 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 SCN2AQ99250 2005 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 C5orf52A6NGY3 159 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 EN2P19622 333 aaPredicted RBP10.45□□□□□ -0.74
PTPN4-201ENST00000263708 ZNF141Q15928 474 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 HSF5Q4G112 596 aaPredicted RBP10.45□□□□□ -0.74
PTPN4-201ENST00000263708 BCL2L2Q92843 193 aaPredicted RBP10.45□□□□□ -0.74
PTPN4-201ENST00000263708 MARC2Q969Z3 335 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 GUSBP08236 651 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 VASH2Q86V25 355 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 OR5H6Q8NGV6 325 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 SEC22CQ9BRL7 303 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 TEX50A0A1B0GTY4 177 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 NRG2O14511 850 aaPredicted RBP10.45□□□□□ -0.74
PTPN4-201ENST00000263708 SOX18P35713 384 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 NTN4Q9HB63 628 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 SLCO1B1Q9Y6L6 691 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 MIA3Q5JRA6 1907 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 WDR1O75083 606 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 GLI4P10075 376 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 PXDC1Q5TGL8 231 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 TGIF2LXQ8IUE1 241 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 CHRDL1Q9BU40 450 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 CNOT2Q9NZN8 540 aaKnown RBP10.45□□□□□ -0.74
PTPN4-201ENST00000263708 CGGBP1Q9UFW8 167 aaPredicted RBP10.45□□□□□ -0.74
PTPN4-201ENST00000263708 GPR55Q9Y2T6 319 aaPredicted RBP10.45□□□□□ -0.74
PTPN4-201ENST00000263708 ADAM11O75078 769 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 VEZF1Q14119 521 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 CMBLQ96DG6 245 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 UFC1Q9Y3C8 167 aa10.45□□□□□ -0.74
PTPN4-201ENST00000263708 ZNF749O43361 778 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 NHLH1Q02575 133 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 NHLH2Q02577 135 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 TGIF2LYQ8IUE0 185 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 SIAH3Q8IW03 269 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 ROBO4Q8WZ75 1007 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 SLC22A12Q96S37 553 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 SLC30A3Q99726 388 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 ARHGDIGQ99819 225 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 NIT2Q9NQR4 276 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 ZNF816Q0VGE8 651 aaPredicted RBP10.44□□□□□ -0.74
PTPN4-201ENST00000263708 GABRG1Q8N1C3 465 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 GPR26Q8NDV2 337 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 IFI44Q8TCB0 444 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 CTSFQ9UBX1 484 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 ZNF727A8MUV8 499 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 TNFSF11O14788 317 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 RNF113BQ8IZP6 322 aaKnown RBP10.44□□□□□ -0.74
PTPN4-201ENST00000263708 YKT6O15498 198 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 ICMTO60725 284 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 TPPP2P59282 170 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 TAS2R60P59551 318 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 ENDOGQ14249 297 aaKnown RBP10.44□□□□□ -0.74
PTPN4-201ENST00000263708 ADAM5Q6NVV9 412 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 OR10P1Q8NGE3 313 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 RNASE1P07998 156 aaKnown RBP10.44□□□□□ -0.74
PTPN4-201ENST00000263708 EPHA2P29317 976 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 TRIM23P36406 574 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 Q499Y3 187 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 SMUG1Q53HV7 270 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 MBOAT2Q6ZWT7 520 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 OR5A2Q8NGI9 324 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 MED17Q9NVC6 651 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 KCNG2Q9UJ96 466 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 CD1BP29016 333 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 PTCRAQ6ISU1 281 aaPredicted RBP10.44□□□□□ -0.74
PTPN4-201ENST00000263708 OR52N5Q8NH56 324 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 CBY1Q9Y3M2 126 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 NALCNQ8IZF0 1738 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 MYADML2A6NDP7 307 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 ARR3P36575 388 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 SOX4Q06945 474 aaPredicted RBP10.44□□□□□ -0.74
PTPN4-201ENST00000263708 ERGIC1Q969X5 290 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 SARGQ9BW04 601 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 POMT1Q9Y6A1 747 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 PSMB1P20618 241 aaKnown RBP10.44□□□□□ -0.74
PTPN4-201ENST00000263708 EMX1Q04741 257 aaPredicted RBP10.44□□□□□ -0.74
PTPN4-201ENST00000263708 THEM4Q5T1C6 240 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 NXF2Q9GZY0 626 aaKnown RBP10.44□□□□□ -0.74
PTPN4-201ENST00000263708 FLVCR1Q9Y5Y0 555 aa10.44□□□□□ -0.74
PTPN4-201ENST00000263708 ZNF142P52746 1687 aaPredicted RBP10.44□□□□□ -0.74
PTPN4-201ENST00000263708 KIR2DS1A0A191URI9 304 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 HCRTR1O43613 425 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 PCSK6P29122 969 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 KIR2DS4P43632 304 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 CSNK1G2P78368 415 aa10.43□□□□□ -0.74
PTPN4-201ENST00000263708 KIR2DS1Q14954 304 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms