RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 TNRC6AQ8NDV7 1962 aaKnown RBP16.05■□□□□ 0.16
VIM-201ENST00000224237 IGKV3D-15A0A087WSY6 115 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 A0A1B0GTH9 108 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 TAF4O00268 1085 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 CTDSP2O14595 271 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 GPR171O14626 319 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 TFECO14948 347 aaPredicted RBP16.05■□□□□ 0.16
VIM-201ENST00000224237 RGS5O15539 181 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 ZNF24P17028 368 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 MSR1P21757 451 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 MAPK3P27361 379 aaPredicted RBP16.05■□□□□ 0.16
VIM-201ENST00000224237 ZNF84P51523 738 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 CAV3P56539 151 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 Q499Y3 187 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 HSD17B12Q53GQ0 312 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 RHOUQ7L0Q8 258 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.05■□□□□ 0.16
VIM-201ENST00000224237 TMEM45BQ96B21 275 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 ZNF775Q96BV0 537 aaPredicted RBP16.05■□□□□ 0.16
VIM-201ENST00000224237 CEP19Q96LK0 163 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 GDF2Q9UK05 429 aaPredicted RBP16.05■□□□□ 0.16
VIM-201ENST00000224237 R4GMQ9 66 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 DNAJC13O75165 2243 aa16.05■□□□□ 0.16
VIM-201ENST00000224237 CACNA1CQ13936 2221 aa16.04■□□□□ 0.16
VIM-201ENST00000224237 hCG_2014768A0A024R1R8 64 aa16.04■□□□□ 0.16
VIM-201ENST00000224237 H2BFMP0C1H6 154 aa16.04■□□□□ 0.16
VIM-201ENST00000224237 CD40LGP29965 261 aa16.04■□□□□ 0.16
VIM-201ENST00000224237 ETV6P41212 452 aa16.04■□□□□ 0.16
VIM-201ENST00000224237 PPP5CP53041 499 aa16.04■□□□□ 0.16
VIM-201ENST00000224237 ZNF45Q02386 682 aa16.04■□□□□ 0.16
VIM-201ENST00000224237 RBM24Q9BX46 236 aaKnown RBP16.04■□□□□ 0.16
VIM-201ENST00000224237 CENPMQ9NSP4 180 aa16.04■□□□□ 0.16
VIM-201ENST00000224237 EMC3Q9P0I2 261 aa16.04■□□□□ 0.16
VIM-201ENST00000224237 ASH2LQ9UBL3 628 aa16.04■□□□□ 0.16
VIM-201ENST00000224237 ANKRD11Q6UB99 2663 aaPredicted RBP16.04■□□□□ 0.16
VIM-201ENST00000224237 ARPC4-TTLL3A0A0A6YYG9 625 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 NCR1O76036 304 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 PNPP00491 289 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 OCM2P0CE71 109 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 DCTDP32321 178 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 NTF4P34130 210 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 KIR3DL2P43630 455 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 SPANXN2Q5MJ10 180 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 DDI2Q5TDH0 399 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 CHMP1BQ7LBR1 199 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 CATSPERDQ86XM0 798 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 CENPSQ8N2Z9 138 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 ZADH2Q8N4Q0 377 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 THRSPQ92748 146 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 WDFY2Q96P53 400 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 NOX4Q9NPH5 578 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 B3GAT2Q9NPZ5 323 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 CMAHPQ9Y471 501 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 TRBV5-5A0A0J9YX44 114 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 A0A1W2PPK0 400 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 ZNF878C9JN71 531 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 SRSF10O75494 262 aaKnown RBP16.03■□□□□ 0.16
VIM-201ENST00000224237 CPN1P15169 458 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 PLXDC2Q6UX71 529 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 IGFL3Q6UXB1 125 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 CFAP77Q6ZQR2 320 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 CCDC190Q86UF4 302 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 GPR137CQ8N3F9 429 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 GPR148Q8TDV2 347 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 DERL3Q96Q80 235 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 PRRG4Q9BZD6 226 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 SPRR3Q9UBC9 169 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 FBXL3Q9UKT7 428 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 GTF2A1LQ9UNN4 478 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 MSRB2Q9Y3D2 182 aa16.03■□□□□ 0.16
VIM-201ENST00000224237 PCDHGA9Q9Y5G4 932 aaKnown RBP16.03■□□□□ 0.16
VIM-201ENST00000224237 PRRC2CQ9Y520 2896 aaKnown RBP16.03■□□□□ 0.16
VIM-201ENST00000224237 A0A087WV48 116 aa16.02■□□□□ 0.16
VIM-201ENST00000224237 ACOD1A6NK06 481 aa16.02■□□□□ 0.16
VIM-201ENST00000224237 LOC110117498-PIK3R3F6TDL0 507 aa16.02■□□□□ 0.16
VIM-201ENST00000224237 IGHG3P01860 377 aa16.02■□□□□ 0.16
VIM-201ENST00000224237 OCMP0CE72 109 aaPredicted RBP16.02■□□□□ 0.16
VIM-201ENST00000224237 RAB3BP20337 219 aa16.02■□□□□ 0.16
VIM-201ENST00000224237 MFGE8Q08431 387 aaPredicted RBP16.02■□□□□ 0.16
VIM-201ENST00000224237 SGCAQ16586 387 aa16.02■□□□□ 0.16
VIM-201ENST00000224237 RIPPLY2Q5TAB7 128 aa16.02■□□□□ 0.16
VIM-201ENST00000224237 KLHL24Q6TFL4 600 aa16.02■□□□□ 0.16
VIM-201ENST00000224237 BTLAQ7Z6A9 289 aa16.02■□□□□ 0.16
VIM-201ENST00000224237 NR2C2APQ86WQ0 139 aa16.02■□□□□ 0.16
VIM-201ENST00000224237 LAX1Q8IWV1 398 aa16.02■□□□□ 0.16
VIM-201ENST00000224237 IL17RDQ8NFM7 739 aa16.02■□□□□ 0.16
VIM-201ENST00000224237 OR10S1Q8NGN2 331 aa16.02■□□□□ 0.16
VIM-201ENST00000224237 FNDC9Q8TBE3 224 aa16.02■□□□□ 0.16
VIM-201ENST00000224237 HTRA1Q92743 480 aa16.02■□□□□ 0.16
VIM-201ENST00000224237 NABP1Q96AH0 204 aa16.02■□□□□ 0.16
VIM-201ENST00000224237 ATF6BQ99941 703 aa16.02■□□□□ 0.16
VIM-201ENST00000224237 ZNF416Q9BWM5 594 aa16.02■□□□□ 0.16
VIM-201ENST00000224237 NIPAL2Q9H841 368 aa16.02■□□□□ 0.16
VIM-201ENST00000224237 RNF122Q9H9V4 155 aa16.02■□□□□ 0.16
VIM-201ENST00000224237 NOSIPQ9Y314 301 aaKnown RBP16.02■□□□□ 0.16
VIM-201ENST00000224237 EMC9Q9Y3B6 208 aa16.02■□□□□ 0.16
VIM-201ENST00000224237 BOD1L1Q8NFC6 3051 aa16.01■□□□□ 0.15
VIM-201ENST00000224237 TMEM269A0A1B0GVZ9 245 aa16.01■□□□□ 0.15
VIM-201ENST00000224237 MAGEB3O15480 346 aa16.01■□□□□ 0.15
VIM-201ENST00000224237 SRMP19623 302 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms