RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 CA5BP1Q8WTZ4 195 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 UBLCP1Q8WVY7 318 aaPredicted RBP3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 ZNRF4Q8WWF5 429 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 VPS33AQ96AX1 596 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 OMA1Q96E52 524 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 ZNF486Q96H40 463 aaPredicted RBP3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 ZNF597Q96LX8 424 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 RILPQ96NA2 401 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 ZIM3Q96PE6 472 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 GAL3ST4Q96RP7 486 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 KCNA7Q96RP8 456 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 HBEGFQ99075 208 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 CCT7Q99832 543 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 TTYH2Q9BSA4 534 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 NAA11Q9BSU3 229 aaPredicted RBP3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 DOHHQ9BU89 302 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 DGCR6LQ9BY27 220 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 OR10A4Q9H209 315 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 PNPLA3Q9NST1 481 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 C1orf109Q9NX04 203 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 TAS2R9Q9NYW1 312 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 SENP1Q9P0U3 644 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 ZNF629Q9UEG4 869 aaPredicted RBP3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 BCAP29Q9UHQ4 241 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 SH3BGRL2Q9UJC5 107 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 RNF6Q9Y252 685 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 C15orf41Q9Y2V0 281 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 TMED5Q9Y3A6 229 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 TIMM22Q9Y584 194 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 DNAJC15Q9Y5T4 150 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 LIPGQ9Y5X9 500 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 HIVEP1P15822 2718 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 NOTCH3Q9UM47 2321 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 DSCAMO60469 2012 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 ARID1AO14497 2285 aa3.02□□□□□ -1.93
CKS1BP3-201ENST00000600888 RAI1Q7Z5J4 1906 aaPredicted RBP3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 PRR14LQ5THK1 2151 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 HEATR1Q9H583 2144 aaKnown RBP3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 MAP1AP78559 2803 aaPredicted RBP3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 IGLV3-32A0A0A0MS00 114 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 ATP6AP2A0A1C7CYW4 349 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 E9PQ18 207 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 G3V3Y1 287 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 H0YAE9 185 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 C19orf84I3L1E1 186 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 UPK1AO00322 258 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 LSM1O15116 133 aaKnown RBP3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 TYROBPO43914 113 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 FADS1O60427 444 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 UGT2B11O75310 529 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 SEC22BO75396 215 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 KRT33AO76009 404 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 SLU7O95391 586 aaKnown RBP3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 COX6B1P14854 86 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 GDF1P27539 372 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 ALDH3A1P30838 453 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 LCN1P31025 176 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 SRD5A2P31213 254 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 ASMTP46597 345 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 SLCO1A2P46721 670 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 RAD23AP54725 363 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 PSMD4P55036 377 aaKnown RBP3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 NUP107P57740 925 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 VSNL1P62760 191 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 PLCXD2Q0VAA5 305 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 CAMK2DQ13557 499 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 PDE7AQ13946 482 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 EXOSC7Q15024 291 aaKnown RBP3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 LTB4RQ15722 352 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 BCL2A1Q16548 175 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 IMPG1Q17R60 797 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 SMU1Q2TAY7 513 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 GLYR1Q49A26 553 aaPredicted RBP3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 ACSF3Q4G176 576 aaPredicted RBP3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 XKR7Q5GH72 579 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 TNFAIP8L3Q5GJ75 292 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 PRAMEF20Q5VT98 475 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 AP1ARQ63HQ0 302 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 ZCCHC12Q6PEW1 402 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 SCIMPQ6UWF3 145 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 ENPP6Q6UWR7 440 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 TMEM64Q6YI46 380 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 C3P1Q6ZMU1 363 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 NCCRP1Q6ZVX7 275 aaPredicted RBP3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 CROCCP2Q86T23 111 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 PLCZ1Q86YW0 608 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 C10orf107Q8IVU9 208 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 LRRC34Q8IZ02 419 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 C4orf33Q8N1A6 199 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 OR2L13Q8N349 312 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 LIX1Q8N485 282 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 RPRMLQ8N4K4 120 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 FADS6Q8N9I5 356 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 CCDC63Q8NA47 563 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 OR7G2Q8NG99 324 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 OR52R1Q8NGF1 315 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 OR1J4Q8NGS1 313 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 OR9A2Q8NGT5 310 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 PSMA8Q8TAA3 256 aa3.01□□□□□ -1.93
CKS1BP3-201ENST00000600888 ZNF519Q8TB69 540 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms