RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 ADAM8P78325 824 aa13.49□□□□□ -0.25
RPRD1A-208ENST00000589050 IL18R1Q13478 541 aa13.49□□□□□ -0.25
RPRD1A-208ENST00000589050 LCN1P1Q5VSP4 162 aa13.49□□□□□ -0.25
RPRD1A-208ENST00000589050 SEZ6L2Q6UXD5 910 aa13.49□□□□□ -0.25
RPRD1A-208ENST00000589050 B3GLCTQ6Y288 498 aa13.49□□□□□ -0.25
RPRD1A-208ENST00000589050 MEPCEQ7L2J0 689 aaKnown RBP13.49□□□□□ -0.25
RPRD1A-208ENST00000589050 SETD9Q8NE22 299 aa13.49□□□□□ -0.25
RPRD1A-208ENST00000589050 TFAP2CQ92754 450 aa13.49□□□□□ -0.25
RPRD1A-208ENST00000589050 ZNF582Q96NG8 517 aaPredicted RBP13.49□□□□□ -0.25
RPRD1A-208ENST00000589050 TEAD3Q99594 435 aa13.49□□□□□ -0.25
RPRD1A-208ENST00000589050 CDADC1Q9BWV3 514 aa13.49□□□□□ -0.25
RPRD1A-208ENST00000589050 RASSF4Q9H2L5 321 aa13.49□□□□□ -0.25
RPRD1A-208ENST00000589050 WDR76Q9H967 626 aa13.49□□□□□ -0.25
RPRD1A-208ENST00000589050 NOX3Q9HBY0 568 aa13.49□□□□□ -0.25
RPRD1A-208ENST00000589050 MOV10Q9HCE1 1003 aaKnown RBP13.49□□□□□ -0.25
RPRD1A-208ENST00000589050 NGBQ9NPG2 151 aa13.49□□□□□ -0.25
RPRD1A-208ENST00000589050 NPAP1Q9NZP6 1156 aa13.49□□□□□ -0.25
RPRD1A-208ENST00000589050 AASSQ9UDR5 926 aa13.49□□□□□ -0.25
RPRD1A-208ENST00000589050 COMMD3-BMI1R4GMX3 469 aa13.49□□□□□ -0.25
RPRD1A-208ENST00000589050 FREM1Q5H8C1 2179 aa13.49□□□□□ -0.25
RPRD1A-208ENST00000589050 HCFC1P51610 2035 aa13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 SLC22A31A6NKX4 558 aa13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 M0R1B8 84 aa13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 ENTPD6O75354 484 aa13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 MMP7P09237 267 aaPredicted RBP13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 GNAO1P09471 354 aa13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 ZNF32P17041 273 aa13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 GABRB1P18505 474 aa13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 ENTPD1P49961 510 aa13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 IDH3GP51553 393 aaPredicted RBP13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 AQP6Q13520 282 aa13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 OCLNQ16625 522 aa13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 SLC25A30Q5SVS4 291 aa13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 MEDAGQ5VYS4 303 aa13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 SYT9Q86SS6 491 aa13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 ERI1Q8IV48 349 aaKnown RBP13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 RHOXF1Q8NHV9 184 aa13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 INTS14Q96SY0 518 aa13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 WACQ9BTA9 647 aa13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 MARCH7Q9H992 704 aa13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 ASH2LQ9UBL3 628 aa13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 KCNN3Q9UGI6 736 aa13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 KCNG2Q9UJ96 466 aa13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 TIMM10BQ9Y5J6 103 aa13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 LHFPL6Q9Y693 200 aa13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 PCNX1Q96RV3 2341 aa13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 HELZ2Q9BYK8 2649 aaKnown RBP13.48□□□□□ -0.25
RPRD1A-208ENST00000589050 ZNF593O00488 134 aaPredicted RBP13.47□□□□□ -0.25
RPRD1A-208ENST00000589050 SELENOFO60613 162 aa13.47□□□□□ -0.25
RPRD1A-208ENST00000589050 SPARCP09486 303 aa13.47□□□□□ -0.25
RPRD1A-208ENST00000589050 HTR1FP30939 366 aa13.47□□□□□ -0.25
RPRD1A-208ENST00000589050 NAA10P41227 235 aaPredicted RBP13.47□□□□□ -0.25
RPRD1A-208ENST00000589050 RPS27P42677 84 aaKnown RBP13.47□□□□□ -0.25
RPRD1A-208ENST00000589050 SCRN3Q0VDG4 424 aa13.47□□□□□ -0.25
RPRD1A-208ENST00000589050 RAB39AQ14964 217 aa13.47□□□□□ -0.25
RPRD1A-208ENST00000589050 MAD2L1BPQ15013 274 aaPredicted RBP13.47□□□□□ -0.25
RPRD1A-208ENST00000589050 PABPC1L2AQ5JQF8 200 aa13.47□□□□□ -0.25
RPRD1A-208ENST00000589050 LINC00346Q8IVM7 164 aa13.47□□□□□ -0.25
RPRD1A-208ENST00000589050 C8orf59Q8N0T1 100 aaPredicted RBP13.47□□□□□ -0.25
RPRD1A-208ENST00000589050 FAM169BQ8N8A8 192 aa13.47□□□□□ -0.25
RPRD1A-208ENST00000589050 OR2AJ1Q8NGZ0 328 aa13.47□□□□□ -0.25
RPRD1A-208ENST00000589050 AKR7LQ8NHP1 331 aa13.47□□□□□ -0.25
RPRD1A-208ENST00000589050 RFKQ969G6 155 aa13.47□□□□□ -0.25
RPRD1A-208ENST00000589050 Q96MT0 163 aa13.47□□□□□ -0.25
RPRD1A-208ENST00000589050 OR2H1Q9GZK4 316 aa13.47□□□□□ -0.25
RPRD1A-208ENST00000589050 CLN6Q9NWW5 311 aa13.47□□□□□ -0.25
RPRD1A-208ENST00000589050 CRNNQ9UBG3 495 aaPredicted RBP13.47□□□□□ -0.25
RPRD1A-208ENST00000589050 WARS2Q9UGM6 360 aaKnown RBP13.47□□□□□ -0.25
RPRD1A-208ENST00000589050 IGHV1-18A0A0C4DH31 117 aa13.46□□□□□ -0.25
RPRD1A-208ENST00000589050 TMCC2O75069 709 aa13.46□□□□□ -0.25
RPRD1A-208ENST00000589050 IGKV3-15P01624 115 aa13.46□□□□□ -0.25
RPRD1A-208ENST00000589050 CELA3BP08861 270 aa13.46□□□□□ -0.25
RPRD1A-208ENST00000589050 MRPL3P09001 348 aaKnown RBP13.46□□□□□ -0.25
RPRD1A-208ENST00000589050 PSKH1P11801 424 aa13.46□□□□□ -0.25
RPRD1A-208ENST00000589050 PSG4Q00888 419 aa13.46□□□□□ -0.25
RPRD1A-208ENST00000589050 PLP2Q04941 152 aa13.46□□□□□ -0.25
RPRD1A-208ENST00000589050 BEX5Q5H9J7 111 aa13.46□□□□□ -0.25
RPRD1A-208ENST00000589050 SLC18B1Q6NT16 456 aa13.46□□□□□ -0.25
RPRD1A-208ENST00000589050 CORO6Q6QEF8 472 aa13.46□□□□□ -0.25
RPRD1A-208ENST00000589050 TMEM108Q6UXF1 575 aa13.46□□□□□ -0.25
RPRD1A-208ENST00000589050 USP51Q70EK9 711 aa13.46□□□□□ -0.25
RPRD1A-208ENST00000589050 TIGD4Q8IY51 512 aa13.46□□□□□ -0.25
RPRD1A-208ENST00000589050 GJC3Q8NFK1 279 aa13.46□□□□□ -0.25
RPRD1A-208ENST00000589050 OR6N2Q8NGY6 317 aa13.46□□□□□ -0.25
RPRD1A-208ENST00000589050 CNIH3Q8TBE1 160 aa13.46□□□□□ -0.25
RPRD1A-208ENST00000589050 APH1BQ8WW43 257 aa13.46□□□□□ -0.25
RPRD1A-208ENST00000589050 PLPPR2Q96GM1 343 aa13.46□□□□□ -0.25
RPRD1A-208ENST00000589050 ZNF75AQ96N20 296 aa13.46□□□□□ -0.25
RPRD1A-208ENST00000589050 WNT5BQ9H1J7 359 aa13.46□□□□□ -0.25
RPRD1A-208ENST00000589050 ESRP2Q9H6T0 727 aaKnown RBP13.46□□□□□ -0.25
RPRD1A-208ENST00000589050 CYB5R1Q9UHQ9 305 aa13.46□□□□□ -0.25
RPRD1A-208ENST00000589050 FBXL3Q9UKT7 428 aa13.46□□□□□ -0.25
RPRD1A-208ENST00000589050 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.46□□□□□ -0.25
RPRD1A-208ENST00000589050 HSPE1-MOB4S4R3N1 261 aa13.46□□□□□ -0.25
RPRD1A-208ENST00000589050 IQCMA0A1B0GVH7 501 aa13.45□□□□□ -0.26
RPRD1A-208ENST00000589050 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.45□□□□□ -0.26
RPRD1A-208ENST00000589050 DPRXA6NFQ7 191 aa13.45□□□□□ -0.26
RPRD1A-208ENST00000589050 SNTNA6NMZ2 147 aa13.45□□□□□ -0.26
RPRD1A-208ENST00000589050 DEFB108AA8MXU0 73 aa13.45□□□□□ -0.26
RPRD1A-208ENST00000589050 RER1O15258 196 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms