RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 OR6X1Q8NH79 312 aa12.59□□□□□ -0.39
COMMD4-225ENST00000569245 TMEM163Q8TC26 289 aa12.59□□□□□ -0.39
COMMD4-225ENST00000569245 UBE2FQ969M7 185 aa12.59□□□□□ -0.39
COMMD4-225ENST00000569245 ZNF566Q969W8 418 aa12.59□□□□□ -0.39
COMMD4-225ENST00000569245 SLC25A44Q96H78 314 aaPredicted RBP12.59□□□□□ -0.39
COMMD4-225ENST00000569245 TSPAN32Q96QS1 320 aa12.59□□□□□ -0.39
COMMD4-225ENST00000569245 SMR3AQ99954 134 aa12.59□□□□□ -0.39
COMMD4-225ENST00000569245 NELFAQ9H3P2 528 aa12.59□□□□□ -0.39
COMMD4-225ENST00000569245 FN3KQ9H479 309 aa12.59□□□□□ -0.39
COMMD4-225ENST00000569245 CBLN4Q9NTU7 201 aa12.59□□□□□ -0.39
COMMD4-225ENST00000569245 GRHPRQ9UBQ7 328 aa12.59□□□□□ -0.39
COMMD4-225ENST00000569245 KLHL21Q9UJP4 597 aa12.59□□□□□ -0.39
COMMD4-225ENST00000569245 ZNF346Q9UL40 294 aaKnown RBP12.59□□□□□ -0.39
COMMD4-225ENST00000569245 ADAM18Q9Y3Q7 739 aa12.59□□□□□ -0.39
COMMD4-225ENST00000569245 CADP27708 2225 aa12.59□□□□□ -0.39
COMMD4-225ENST00000569245 RAI1Q7Z5J4 1906 aaPredicted RBP12.58□□□□□ -0.39
COMMD4-225ENST00000569245 USF3Q68DE3 2245 aa12.58□□□□□ -0.39
COMMD4-225ENST00000569245 TLX2O43763 284 aaPredicted RBP12.58□□□□□ -0.4
COMMD4-225ENST00000569245 PRKYO43930 277 aa12.58□□□□□ -0.4
COMMD4-225ENST00000569245 WBP4O75554 376 aaKnown RBP12.58□□□□□ -0.4
COMMD4-225ENST00000569245 CECR9P0C854 216 aa12.58□□□□□ -0.4
COMMD4-225ENST00000569245 BMP4P12644 408 aa12.58□□□□□ -0.4
COMMD4-225ENST00000569245 CBR1P16152 277 aa12.58□□□□□ -0.4
COMMD4-225ENST00000569245 NOS3P29474 1203 aa12.58□□□□□ -0.4
COMMD4-225ENST00000569245 APOBEC3AP31941 199 aaPredicted RBP12.58□□□□□ -0.4
COMMD4-225ENST00000569245 ARR3P36575 388 aa12.58□□□□□ -0.4
COMMD4-225ENST00000569245 DAP3P51398 398 aaKnown RBP12.58□□□□□ -0.4
COMMD4-225ENST00000569245 IDH3GP51553 393 aaPredicted RBP12.58□□□□□ -0.4
COMMD4-225ENST00000569245 CXCR4P61073 352 aa12.58□□□□□ -0.4
COMMD4-225ENST00000569245 RPL27P61353 136 aaKnown RBP12.58□□□□□ -0.4
COMMD4-225ENST00000569245 ETFDHQ16134 617 aa12.58□□□□□ -0.4
COMMD4-225ENST00000569245 OCLNQ16625 522 aa12.58□□□□□ -0.4
COMMD4-225ENST00000569245 CLEC12BQ2HXU8 276 aa12.58□□□□□ -0.4
COMMD4-225ENST00000569245 SLC35F1Q5T1Q4 408 aa12.58□□□□□ -0.4
COMMD4-225ENST00000569245 LAIR2Q6ISS4 152 aa12.58□□□□□ -0.4
COMMD4-225ENST00000569245 UGT2A3Q6UWM9 527 aa12.58□□□□□ -0.4
COMMD4-225ENST00000569245 MDP1Q86V88 176 aa12.58□□□□□ -0.4
COMMD4-225ENST00000569245 CIARTQ8N365 385 aaPredicted RBP12.58□□□□□ -0.4
COMMD4-225ENST00000569245 APH1BQ8WW43 257 aa12.58□□□□□ -0.4
COMMD4-225ENST00000569245 PLEKHA8Q96JA3 519 aa12.58□□□□□ -0.4
COMMD4-225ENST00000569245 Q96M85 177 aa12.58□□□□□ -0.4
COMMD4-225ENST00000569245 SNX18Q96RF0 628 aa12.58□□□□□ -0.4
COMMD4-225ENST00000569245 NR1H4Q96RI1 486 aaPredicted RBP12.58□□□□□ -0.4
COMMD4-225ENST00000569245 DDOQ99489 341 aa12.58□□□□□ -0.4
COMMD4-225ENST00000569245 CACNG6Q9BXT2 260 aa12.58□□□□□ -0.4
COMMD4-225ENST00000569245 GLTPQ9NZD2 209 aa12.58□□□□□ -0.4
COMMD4-225ENST00000569245 PCDHGB5Q9Y5G0 923 aa12.58□□□□□ -0.4
COMMD4-225ENST00000569245 TEX13CA0A0J9YWL9 993 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 RIIAD1A6NNX1 92 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 M0R129 80 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 SLC2A10O95528 541 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 IGHV4-39P01824 125 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 IGHG1P01857 330 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 HLA-HP01893 362 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 CELA3BP08861 270 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 B4GALT1P15291 398 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 HIST1H1CP16403 213 aaKnown RBP12.57□□□□□ -0.4
COMMD4-225ENST00000569245 ZNF3P17036 446 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 CLRN1P58418 232 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 NAAAQ02083 359 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 PIGFQ07326 219 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.57□□□□□ -0.4
COMMD4-225ENST00000569245 RAB35Q15286 201 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 C3orf36Q3SXR2 165 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 C6orf141Q5SZD1 244 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 ARMC4Q5T2S8 1044 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 MEDAGQ5VYS4 303 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 FAM205BPQ63HN1 556 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 VHLLQ6RSH7 139 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 CLEC9AQ6UXN8 241 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 ARIH2OSQ8N7S6 290 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 FAM169BQ8N8A8 192 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 OR4K13Q8NH42 304 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 ZNF519Q8TB69 540 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 CNIH3Q8TBE1 160 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 ASB10Q8WXI3 467 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 NANOS1Q8WY41 292 aaKnown RBP12.57□□□□□ -0.4
COMMD4-225ENST00000569245 HDAC2Q92769 488 aaKnown RBP12.57□□□□□ -0.4
COMMD4-225ENST00000569245 TMEM54Q969K7 222 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 RASD2Q96D21 266 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 Q96MT0 163 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 IL4I1Q96RQ9 567 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 FOXB1Q99853 325 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 YTHDF1Q9BYJ9 559 aaKnown RBP12.57□□□□□ -0.4
COMMD4-225ENST00000569245 BARX1Q9HBU1 254 aaPredicted RBP12.57□□□□□ -0.4
COMMD4-225ENST00000569245 CRNNQ9UBG3 495 aaPredicted RBP12.57□□□□□ -0.4
COMMD4-225ENST00000569245 GDF2Q9UK05 429 aaPredicted RBP12.57□□□□□ -0.4
COMMD4-225ENST00000569245 NF1P21359 2839 aa12.57□□□□□ -0.4
COMMD4-225ENST00000569245 NIPBLQ6KC79 2804 aaeCLIP12.56□□□□□ -0.4
COMMD4-225ENST00000569245 A6NIZ1 184 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 FAM171A2A8MVW0 826 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 SSX4O60224 188 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 NDUFS7O75251 213 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 IGKV3-15P01624 115 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 IGLV1-44P01699 117 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 QDPRP09417 244 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 ACVR1BP36896 505 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 RAP1BP61224 184 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 RAP1AP62834 184 aa12.56□□□□□ -0.4
COMMD4-225ENST00000569245 CSNK2BP67870 215 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms