RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 APEX1P27695 318 aaKnown RBP14.36□□□□□ -0.11
USB1-211ENST00000565662 SLC6A6P31641 620 aa14.36□□□□□ -0.11
USB1-211ENST00000565662 SPIBQ01892 262 aa14.36□□□□□ -0.11
USB1-211ENST00000565662 FMODQ06828 376 aa14.36□□□□□ -0.11
USB1-211ENST00000565662 SLC3A1Q07837 685 aa14.36□□□□□ -0.11
USB1-211ENST00000565662 MBNL2Q5VZF2 373 aaKnown RBP14.36□□□□□ -0.11
USB1-211ENST00000565662 SMARCD3Q6STE5 483 aa14.36□□□□□ -0.11
USB1-211ENST00000565662 OR1J1Q8NGS3 322 aa14.36□□□□□ -0.11
USB1-211ENST00000565662 FGFBP3Q8TAT2 258 aa14.36□□□□□ -0.11
USB1-211ENST00000565662 POM121L2Q96KW2 1035 aa14.36□□□□□ -0.11
USB1-211ENST00000565662 DCLRE1CQ96SD1 692 aaKnown RBP14.36□□□□□ -0.11
USB1-211ENST00000565662 OR2H1Q9GZK4 316 aa14.36□□□□□ -0.11
USB1-211ENST00000565662 IL1RAPQ9NPH3 570 aa14.36□□□□□ -0.11
USB1-211ENST00000565662 VSX1Q9NZR4 365 aaPredicted RBP14.36□□□□□ -0.11
USB1-211ENST00000565662 TAAR3PQ9P1P4 343 aa14.36□□□□□ -0.11
USB1-211ENST00000565662 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.35□□□□□ -0.113e-7■□□□□ 10
USB1-211ENST00000565662 LOC100289279A0A1B0GTE1 492 aa14.35□□□□□ -0.11
USB1-211ENST00000565662 C5orf49A4QMS7 147 aa14.35□□□□□ -0.11
USB1-211ENST00000565662 UNC119BA6NIH7 251 aa14.35□□□□□ -0.11
USB1-211ENST00000565662 ARPC2O15144 300 aa14.35□□□□□ -0.11
USB1-211ENST00000565662 IDH3BO43837 385 aa14.35□□□□□ -0.11
USB1-211ENST00000565662 KHDRBS3O75525 346 aaKnown RBP14.35□□□□□ -0.11
USB1-211ENST00000565662 LY6HO94772 140 aa14.35□□□□□ -0.11
USB1-211ENST00000565662 FAM157BP0CG42 384 aa14.35□□□□□ -0.11
USB1-211ENST00000565662 LAP3P28838 519 aa14.35□□□□□ -0.11
USB1-211ENST00000565662 CDAP32320 146 aa14.35□□□□□ -0.11
USB1-211ENST00000565662 GPR6P46095 362 aaPredicted RBP14.35□□□□□ -0.11
USB1-211ENST00000565662 OMPP47874 163 aa14.35□□□□□ -0.11
USB1-211ENST00000565662 RGS6P49758 472 aa14.35□□□□□ -0.11
USB1-211ENST00000565662 ERVK-25P63136 954 aa14.35□□□□□ -0.11
USB1-211ENST00000565662 PSG4Q00888 419 aa14.35□□□□□ -0.11
USB1-211ENST00000565662 FHL1Q13642 323 aa14.35□□□□□ -0.11
USB1-211ENST00000565662 IGFN1Q86VF2 1251 aa14.35□□□□□ -0.11
USB1-211ENST00000565662 GLB1L2Q8IW92 636 aa14.35□□□□□ -0.11
USB1-211ENST00000565662 FANK1Q8TC84 345 aa14.35□□□□□ -0.11
USB1-211ENST00000565662 CDRT15Q96T59 188 aa14.35□□□□□ -0.11
USB1-211ENST00000565662 EGLN1Q9GZT9 426 aa14.35□□□□□ -0.11
USB1-211ENST00000565662 TPK1Q9H3S4 243 aa14.35□□□□□ -0.11
USB1-211ENST00000565662 TBCCD1Q9NVR7 557 aa14.35□□□□□ -0.11
USB1-211ENST00000565662 ACTR3BQ9P1U1 418 aa14.35□□□□□ -0.11
USB1-211ENST00000565662 CD300AQ9UGN4 299 aa14.35□□□□□ -0.11
USB1-211ENST00000565662 ZDHHC8Q9ULC8 765 aa14.35□□□□□ -0.11
USB1-211ENST00000565662 IGHV4-61A0A0C4DH41 118 aa14.34□□□□□ -0.11
USB1-211ENST00000565662 DYNC1I1O14576 645 aa14.34□□□□□ -0.11
USB1-211ENST00000565662 ARPC3O15145 178 aa14.34□□□□□ -0.11
USB1-211ENST00000565662 SEMG1P04279 462 aa14.34□□□□□ -0.11
USB1-211ENST00000565662 ANPEPP15144 967 aa14.34□□□□□ -0.11
USB1-211ENST00000565662 TCN1P20061 433 aaPredicted RBP14.34□□□□□ -0.11
USB1-211ENST00000565662 CCNOP22674 350 aa14.34□□□□□ -0.11
USB1-211ENST00000565662 CALB2P22676 271 aa14.34□□□□□ -0.11
USB1-211ENST00000565662 ALDH3B1P43353 468 aa14.34□□□□□ -0.11
USB1-211ENST00000565662 MESTQ5EB52 335 aa14.34□□□□□ -0.11
USB1-211ENST00000565662 JAZF1Q86VZ6 243 aa14.34□□□□□ -0.11
USB1-211ENST00000565662 DEFB107AQ8IZN7 70 aa14.34□□□□□ -0.11
USB1-211ENST00000565662 LINC01356Q8N9X3 169 aa14.34□□□□□ -0.11
USB1-211ENST00000565662 OR52L1Q8NGH7 329 aa14.34□□□□□ -0.11
USB1-211ENST00000565662 ELMOD3Q96FG2 381 aa14.34□□□□□ -0.11
USB1-211ENST00000565662 TIMD4Q96H15 378 aa14.34□□□□□ -0.11
USB1-211ENST00000565662 Q96M85 177 aa14.34□□□□□ -0.11
USB1-211ENST00000565662 MAGIXQ9H6Y5 334 aa14.34□□□□□ -0.11
USB1-211ENST00000565662 DECR2Q9NUI1 292 aa14.34□□□□□ -0.11
USB1-211ENST00000565662 ADAM21Q9UKJ8 722 aa14.34□□□□□ -0.11
USB1-211ENST00000565662 IGKV1D-43A0A0B4J1Z2 117 aa14.33□□□□□ -0.12
USB1-211ENST00000565662 SGCEO43556 437 aa14.33□□□□□ -0.12
USB1-211ENST00000565662 OR10H3O60404 316 aa14.33□□□□□ -0.12
USB1-211ENST00000565662 DOK2O60496 412 aa14.33□□□□□ -0.12
USB1-211ENST00000565662 PTP4A3O75365 173 aa14.33□□□□□ -0.12
USB1-211ENST00000565662 ABHD16AO95870 558 aa14.33□□□□□ -0.12
USB1-211ENST00000565662 FAM107AO95990 144 aa14.33□□□□□ -0.12
USB1-211ENST00000565662 RENP00797 406 aa14.33□□□□□ -0.12
USB1-211ENST00000565662 ADH4P08319 380 aa14.33□□□□□ -0.12
USB1-211ENST00000565662 NOS3P29474 1203 aa14.33□□□□□ -0.12
USB1-211ENST00000565662 GLO1Q04760 184 aa14.33□□□□□ -0.12
USB1-211ENST00000565662 SLC36A3Q495N2 470 aa14.33□□□□□ -0.12
USB1-211ENST00000565662 TBPL2Q6SJ96 375 aa14.33□□□□□ -0.12
USB1-211ENST00000565662 RNF148Q8N7C7 305 aa14.33□□□□□ -0.12
USB1-211ENST00000565662 ICA1LQ8NDH6 482 aa14.33□□□□□ -0.12
USB1-211ENST00000565662 C1orf159Q96HA4 380 aa14.33□□□□□ -0.12
USB1-211ENST00000565662 RACGAP1Q9H0H5 632 aa14.33□□□□□ -0.12
USB1-211ENST00000565662 HDHD2Q9H0R4 259 aa14.33□□□□□ -0.12
USB1-211ENST00000565662 SAP30LQ9HAJ7 183 aa14.33□□□□□ -0.12
USB1-211ENST00000565662 GMPR2Q9P2T1 348 aaKnown RBP14.33□□□□□ -0.12
USB1-211ENST00000565662 PRPF19Q9UMS4 504 aaKnown RBP14.33□□□□□ -0.12
USB1-211ENST00000565662 POLR1DQ9Y2S0 133 aa14.33□□□□□ -0.12
USB1-211ENST00000565662 ADAM18Q9Y3Q7 739 aa14.33□□□□□ -0.12
USB1-211ENST00000565662 SONP18583 2426 aaKnown RBP14.33□□□□□ -0.12
USB1-211ENST00000565662 JMJD1CQ15652 2540 aa14.33□□□□□ -0.12
USB1-211ENST00000565662 TRBV4-1A0A0J9YWV2 114 aa14.32□□□□□ -0.12
USB1-211ENST00000565662 OR6C6A6NF89 314 aa14.32□□□□□ -0.12
USB1-211ENST00000565662 B4DSR2 109 aa14.32□□□□□ -0.12
USB1-211ENST00000565662 SRD5A1P18405 259 aa14.32□□□□□ -0.12
USB1-211ENST00000565662 TNFSF4P23510 183 aa14.32□□□□□ -0.12
USB1-211ENST00000565662 RRM2P31350 389 aa14.32□□□□□ -0.12
USB1-211ENST00000565662 HTR5AP47898 357 aa14.32□□□□□ -0.12
USB1-211ENST00000565662 ZNF81P51508 661 aa14.32□□□□□ -0.12
USB1-211ENST00000565662 PPP1CBP62140 327 aa14.32□□□□□ -0.12
USB1-211ENST00000565662 ENDOGQ14249 297 aaKnown RBP14.32□□□□□ -0.12
USB1-211ENST00000565662 ELFN2Q5R3F8 820 aa14.32□□□□□ -0.12
USB1-211ENST00000565662 PRIMA1Q86XR5 153 aa14.32□□□□□ -0.12
USB1-211ENST00000565662 ZDHHC21Q8IVQ6 265 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms