RNA–Protein interactions for RNA: ENST00000561911.5

SPG7-204, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 1,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-204ENST00000561911 TEAD3Q99594 435 aa13.72□□□□□ -0.21
SPG7-204ENST00000561911 KCNN2Q9H2S1 579 aa13.72□□□□□ -0.21
SPG7-204ENST00000561911 MARCH7Q9H992 704 aa13.72□□□□□ -0.21
SPG7-204ENST00000561911 NOX3Q9HBY0 568 aa13.72□□□□□ -0.21
SPG7-204ENST00000561911 CLN6Q9NWW5 311 aa13.72□□□□□ -0.21
SPG7-204ENST00000561911 B3GNT2Q9NY97 397 aa13.72□□□□□ -0.21
SPG7-204ENST00000561911 KCNG2Q9UJ96 466 aa13.72□□□□□ -0.21
SPG7-204ENST00000561911 POLR1DQ9Y2S0 133 aa13.72□□□□□ -0.21
SPG7-204ENST00000561911 COMMD3-BMI1R4GMX3 469 aa13.72□□□□□ -0.21
SPG7-204ENST00000561911 MMP7P09237 267 aaPredicted RBP13.71□□□□□ -0.21
SPG7-204ENST00000561911 ZNF823P16415 610 aa13.71□□□□□ -0.21
SPG7-204ENST00000561911 HTR1FP30939 366 aa13.71□□□□□ -0.21
SPG7-204ENST00000561911 PCBD1P61457 104 aa13.71□□□□□ -0.21
SPG7-204ENST00000561911 ADAM8P78325 824 aa13.71□□□□□ -0.21
SPG7-204ENST00000561911 GSG1Q2KHT4 349 aa13.71□□□□□ -0.21
SPG7-204ENST00000561911 SEZ6L2Q6UXD5 910 aa13.71□□□□□ -0.21
SPG7-204ENST00000561911 THAP5Q7Z6K1 395 aa13.71□□□□□ -0.21
SPG7-204ENST00000561911 MDP1Q86V88 176 aa13.71□□□□□ -0.21
SPG7-204ENST00000561911 APH1BQ8WW43 257 aa13.71□□□□□ -0.21
SPG7-204ENST00000561911 FBXO17Q96EF6 278 aa13.71□□□□□ -0.21
SPG7-204ENST00000561911 Q96MT0 163 aa13.71□□□□□ -0.21
SPG7-204ENST00000561911 PSMG3-AS1Q96PY0 264 aa13.71□□□□□ -0.21
SPG7-204ENST00000561911 INTS14Q96SY0 518 aa13.71□□□□□ -0.21
SPG7-204ENST00000561911 SPOCK3Q9BQ16 436 aa13.71□□□□□ -0.21
SPG7-204ENST00000561911 WACQ9BTA9 647 aa13.71□□□□□ -0.21
SPG7-204ENST00000561911 WDR76Q9H967 626 aa13.71□□□□□ -0.21
SPG7-204ENST00000561911 CCNB1IP1Q9NPC3 277 aa13.71□□□□□ -0.21
SPG7-204ENST00000561911 CRIM1Q9NZV1 1036 aa13.71□□□□□ -0.21
SPG7-204ENST00000561911 ASH2LQ9UBL3 628 aa13.71□□□□□ -0.21
SPG7-204ENST00000561911 WARS2Q9UGM6 360 aaKnown RBP13.71□□□□□ -0.21
SPG7-204ENST00000561911 RAB26Q9ULW5 256 aa13.71□□□□□ -0.21
SPG7-204ENST00000561911 SNTNA6NMZ2 147 aa13.7□□□□□ -0.22
SPG7-204ENST00000561911 WBP4O75554 376 aaKnown RBP13.7□□□□□ -0.22
SPG7-204ENST00000561911 ZNF32P17041 273 aa13.7□□□□□ -0.22
SPG7-204ENST00000561911 PAX7P23759 505 aa13.7□□□□□ -0.22
SPG7-204ENST00000561911 ARR3P36575 388 aa13.7□□□□□ -0.22
SPG7-204ENST00000561911 ENTPD1P49961 510 aa13.7□□□□□ -0.22
SPG7-204ENST00000561911 RAB1AP62820 205 aa13.7□□□□□ -0.22
SPG7-204ENST00000561911 PIGFQ07326 219 aa13.7□□□□□ -0.22
SPG7-204ENST00000561911 SCRN3Q0VDG4 424 aa13.7□□□□□ -0.22
SPG7-204ENST00000561911 TMED1Q13445 227 aa13.7□□□□□ -0.22
SPG7-204ENST00000561911 AQP6Q13520 282 aa13.7□□□□□ -0.22
SPG7-204ENST00000561911 GGTLC2Q14390 218 aa13.7□□□□□ -0.22
SPG7-204ENST00000561911 TMEM53Q6P2H8 277 aa13.7□□□□□ -0.22
SPG7-204ENST00000561911 SYT9Q86SS6 491 aa13.7□□□□□ -0.22
SPG7-204ENST00000561911 ERI1Q8IV48 349 aaKnown RBP13.7□□□□□ -0.22
SPG7-204ENST00000561911 TIGD4Q8IY51 512 aa13.7□□□□□ -0.22
SPG7-204ENST00000561911 FAM222BQ8WU58 562 aa13.7□□□□□ -0.22
SPG7-204ENST00000561911 CNN2Q99439 309 aaKnown RBP13.7□□□□□ -0.22
SPG7-204ENST00000561911 CDADC1Q9BWV3 514 aa13.7□□□□□ -0.22
SPG7-204ENST00000561911 ANKRD60Q9BZ19 345 aa13.7□□□□□ -0.22
SPG7-204ENST00000561911 RNF121Q9H920 327 aa13.7□□□□□ -0.22
SPG7-204ENST00000561911 MOV10Q9HCE1 1003 aaKnown RBP13.7□□□□□ -0.22
SPG7-204ENST00000561911 HAO2Q9NYQ3 351 aa13.7□□□□□ -0.22
SPG7-204ENST00000561911 NPAP1Q9NZP6 1156 aa13.7□□□□□ -0.22
SPG7-204ENST00000561911 CYB5R1Q9UHQ9 305 aa13.7□□□□□ -0.22
SPG7-204ENST00000561911 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.7□□□□□ -0.22
SPG7-204ENST00000561911 TIMM10BQ9Y5J6 103 aa13.7□□□□□ -0.22
SPG7-204ENST00000561911 LHFPL6Q9Y693 200 aa13.7□□□□□ -0.22
SPG7-204ENST00000561911 ZNF593O00488 134 aaPredicted RBP13.69□□□□□ -0.22
SPG7-204ENST00000561911 SELENOFO60613 162 aa13.69□□□□□ -0.22
SPG7-204ENST00000561911 RAB36O95755 333 aa13.69□□□□□ -0.22
SPG7-204ENST00000561911 SPARCP09486 303 aa13.69□□□□□ -0.22
SPG7-204ENST00000561911 EPXP11678 715 aa13.69□□□□□ -0.22
SPG7-204ENST00000561911 CBR1P16152 277 aa13.69□□□□□ -0.22
SPG7-204ENST00000561911 MYF6P23409 242 aa13.69□□□□□ -0.22
SPG7-204ENST00000561911 NAA10P41227 235 aaPredicted RBP13.69□□□□□ -0.22
SPG7-204ENST00000561911 ZNF83P51522 516 aa13.69□□□□□ -0.22
SPG7-204ENST00000561911 PCK2Q16822 640 aa13.69□□□□□ -0.22
SPG7-204ENST00000561911 TEX30Q5JUR7 227 aa13.69□□□□□ -0.22
SPG7-204ENST00000561911 SLC18B1Q6NT16 456 aa13.69□□□□□ -0.22
SPG7-204ENST00000561911 LINC00346Q8IVM7 164 aa13.69□□□□□ -0.22
SPG7-204ENST00000561911 FAM169BQ8N8A8 192 aa13.69□□□□□ -0.22
SPG7-204ENST00000561911 OR6N2Q8NGY6 317 aa13.69□□□□□ -0.22
SPG7-204ENST00000561911 CNIH3Q8TBE1 160 aa13.69□□□□□ -0.22
SPG7-204ENST00000561911 FBLIM1Q8WUP2 373 aa13.69□□□□□ -0.22
SPG7-204ENST00000561911 C1QTNF6Q9BXI9 259 aa13.69□□□□□ -0.22
SPG7-204ENST00000561911 OR2H1Q9GZK4 316 aa13.69□□□□□ -0.22
SPG7-204ENST00000561911 SLC24A3Q9HC58 644 aa13.69□□□□□ -0.22
SPG7-204ENST00000561911 NGBQ9NPG2 151 aa13.69□□□□□ -0.22
SPG7-204ENST00000561911 COL12A1Q99715 3063 aa13.68□□□□□ -0.22
SPG7-204ENST00000561911 CASKO14936 926 aa13.68□□□□□ -0.22
SPG7-204ENST00000561911 TMCC2O75069 709 aa13.68□□□□□ -0.22
SPG7-204ENST00000561911 IGKV3-15P01624 115 aa13.68□□□□□ -0.22
SPG7-204ENST00000561911 MRPL3P09001 348 aaKnown RBP13.68□□□□□ -0.22
SPG7-204ENST00000561911 PSKH1P11801 424 aa13.68□□□□□ -0.22
SPG7-204ENST00000561911 CRYGSP22914 178 aa13.68□□□□□ -0.22
SPG7-204ENST00000561911 RPS27P42677 84 aaKnown RBP13.68□□□□□ -0.22
SPG7-204ENST00000561911 MTNR1AP48039 350 aa13.68□□□□□ -0.22
SPG7-204ENST00000561911 IDH3GP51553 393 aaPredicted RBP13.68□□□□□ -0.22
SPG7-204ENST00000561911 NUDT6P53370 316 aa13.68□□□□□ -0.22
SPG7-204ENST00000561911 HIST1H3AP68431 136 aa13.68□□□□□ -0.22
SPG7-204ENST00000561911 PSG4Q00888 419 aa13.68□□□□□ -0.22
SPG7-204ENST00000561911 ZNF91Q05481 1191 aa13.68□□□□□ -0.22
SPG7-204ENST00000561911 PABPC1L2AQ5JQF8 200 aa13.68□□□□□ -0.22
SPG7-204ENST00000561911 HIST2H3PS2Q5TEC6 136 aa13.68□□□□□ -0.22
SPG7-204ENST00000561911 SP5Q6BEB4 398 aaPredicted RBP13.68□□□□□ -0.22
SPG7-204ENST00000561911 CORO6Q6QEF8 472 aa13.68□□□□□ -0.22
SPG7-204ENST00000561911 HIST2H3AQ71DI3 136 aa13.68□□□□□ -0.22
SPG7-204ENST00000561911 SLC16A9Q7RTY1 509 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms