RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 OR2AJ1Q8NGZ0 328 aa12.24□□□□□ -0.45
TPM1-215ENST00000558868 OR5AK2Q8NH90 309 aa12.24□□□□□ -0.45
TPM1-215ENST00000558868 SNIP1Q8TAD8 396 aaKnown RBP12.24□□□□□ -0.45
TPM1-215ENST00000558868 RNF128Q8TEB7 428 aa12.24□□□□□ -0.45
TPM1-215ENST00000558868 SLC39A7Q92504 469 aa12.24□□□□□ -0.45
TPM1-215ENST00000558868 DCBLD2Q96PD2 775 aa12.24□□□□□ -0.45
TPM1-215ENST00000558868 SMAD5Q99717 465 aaKnown RBP12.24□□□□□ -0.45
TPM1-215ENST00000558868 EXO5Q9H790 373 aa12.24□□□□□ -0.45
TPM1-215ENST00000558868 SEC61A2Q9H9S3 476 aa12.24□□□□□ -0.45
TPM1-215ENST00000558868 PALMDQ9NP74 551 aa12.24□□□□□ -0.45
TPM1-215ENST00000558868 EMC3Q9P0I2 261 aa12.24□□□□□ -0.45
TPM1-215ENST00000558868 POLR1DQ9Y2S0 133 aa12.24□□□□□ -0.45
TPM1-215ENST00000558868 FLVCR1Q9Y5Y0 555 aa12.24□□□□□ -0.45
TPM1-215ENST00000558868 NCKAP5O14513 1909 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 TRGV5A0A0B4J1U4 118 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 IGKV1D-43A0A0B4J1Z2 117 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 TRAV1-2A0A0B4J238 106 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 ZNF716A6NP11 495 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 PRR32B1ATL7 298 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 ZNF879B4DU55 563 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 PSMD9O00233 223 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 LRRTM2O43300 516 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 MPZL1O95297 269 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 CELA3AP09093 270 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 LSM6P62312 80 aaKnown RBP12.23□□□□□ -0.45
TPM1-215ENST00000558868 MXD1Q05195 221 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 HNRNPA0Q13151 305 aaKnown RBP12.23□□□□□ -0.45
TPM1-215ENST00000558868 INAQ16352 499 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 ZMAT1Q5H9K5 638 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 LRFN4Q6PJG9 635 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 LRRN1Q6UXK5 716 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 RHOUQ7L0Q8 258 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 AAED1Q7RTV5 226 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 DCXRQ7Z4W1 244 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.23□□□□□ -0.45
TPM1-215ENST00000558868 ZIC4Q8N9L1 334 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 OR2G2Q8NGZ5 317 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 ROBO4Q8WZ75 1007 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 TMEM45BQ96B21 275 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 ZNF385AQ96PM9 386 aaKnown RBP12.23□□□□□ -0.45
TPM1-215ENST00000558868 TPK1Q9H3S4 243 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 C1orf198Q9H425 327 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 ZDHHC11Q9H8X9 412 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 SMURF1Q9HCE7 757 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 AKIP1Q9NQ31 210 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 CYB5R1Q9UHQ9 305 aa12.23□□□□□ -0.45
TPM1-215ENST00000558868 SMG1Q96Q15 3661 aaKnown RBP12.22□□□□□ -0.45
TPM1-215ENST00000558868 KIAA1549Q9HCM3 1950 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 IGKV3D-15A0A087WSY6 115 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 OR6C65A6NJZ3 312 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 TAF4O00268 1085 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 TFECO14948 347 aaPredicted RBP12.22□□□□□ -0.45
TPM1-215ENST00000558868 DHHO43323 396 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 H2BFMP0C1H6 154 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 MSR1P21757 451 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 CALRP27797 417 aaKnown RBP12.22□□□□□ -0.45
TPM1-215ENST00000558868 DCTDP32321 178 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 RPS27P42677 84 aaKnown RBP12.22□□□□□ -0.45
TPM1-215ENST00000558868 SRYQ05066 204 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 MZT2AQ6P582 158 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 KLHL24Q6TFL4 600 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 UNQ9370/PRO34162Q6UXP9 181 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 LRRC69Q6ZNQ3 347 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 FOXL2NBQ6ZUU3 175 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 ZNF676Q8N7Q3 588 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 ST7LQ8TDW4 575 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 RNF133Q8WVZ7 376 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 ACOT12Q8WYK0 555 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 CEP19Q96LK0 163 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 AMELYQ99218 206 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 KCNS3Q9BQ31 491 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 PRRG4Q9BZD6 226 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 ULBP2Q9BZM5 246 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 NIPAL2Q9H841 368 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 RNF122Q9H9V4 155 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 POLE4Q9NR33 117 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 PARPBPQ9NWS1 579 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 FOXD3Q9UJU5 478 aaPredicted RBP12.22□□□□□ -0.45
TPM1-215ENST00000558868 ING1Q9UK53 422 aaPredicted RBP12.22□□□□□ -0.45
TPM1-215ENST00000558868 FREM3P0C091 2139 aa12.22□□□□□ -0.45
TPM1-215ENST00000558868 OR4C45A6NMZ5 311 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 PDCD5O14737 125 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 TMEM127O75204 238 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 ZFPL1O95159 310 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 UCHL1P09936 223 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 CLEC2LP0C7M8 214 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 PSKH1P11801 424 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 CPN1P15169 458 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 NPR2P20594 1047 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 SELENOPP49908 381 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 NANOS3P60323 173 aaKnown RBP12.21□□□□□ -0.45
TPM1-215ENST00000558868 ZNF45Q02386 682 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 RNPS1Q15287 305 aaKnown RBP12.21□□□□□ -0.45
TPM1-215ENST00000558868 HSD17B12Q53GQ0 312 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 RIPPLY2Q5TAB7 128 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 IGFL3Q6UXB1 125 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 LINC00346Q8IVM7 164 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 GPR137CQ8N3F9 429 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 GPR148Q8TDV2 347 aa12.21□□□□□ -0.45
TPM1-215ENST00000558868 RNF166Q96A37 237 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms