RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 GDF1P27539 372 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 RBMS1P29558 406 aaKnown RBP4.66□□□□□ -1.66
UBE4A-203ENST00000545354 ARRB2P32121 409 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 OR1D2P34982 312 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 CTSOP43234 321 aaPredicted RBP4.66□□□□□ -1.66
UBE4A-203ENST00000545354 VEGFBP49765 207 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 METAP2P50579 478 aaKnown RBP eCLIP4.66□□□□□ -1.66
UBE4A-203ENST00000545354 ART1P52961 327 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 PNLIPRP1P54315 467 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 TAS2R50P59544 299 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 SEC61A1P61619 476 aaKnown RBP4.66□□□□□ -1.66
UBE4A-203ENST00000545354 LSM3P62310 102 aaKnown RBP4.66□□□□□ -1.66
UBE4A-203ENST00000545354 SCAPQ12770 1279 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 IL11RAQ14626 422 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 PSG5Q15238 335 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 UGT8Q16880 541 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 SPIN4Q56A73 249 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 C3orf38Q5JPI3 329 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 KIAA0895LQ68EN5 471 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 CPEB2Q7Z5Q1 589 aaKnown RBP4.66□□□□□ -1.66
UBE4A-203ENST00000545354 DOLPP1Q86YN1 238 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 CFAP52Q8N1V2 620 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 D2HGDHQ8N465 521 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 C2orf73Q8N5S3 287 aaPredicted RBP4.66□□□□□ -1.66
UBE4A-203ENST00000545354 PRELID2Q8N945 189 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 OR52B6Q8NGF0 335 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 OR1J2Q8NGS2 313 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 PCNPQ8WW12 178 aaKnown RBP4.66□□□□□ -1.66
UBE4A-203ENST00000545354 DAZLQ92904 295 aaKnown RBP4.66□□□□□ -1.66
UBE4A-203ENST00000545354 MOB3AQ96BX8 217 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 COQ8BQ96D53 544 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 ELMOD3Q96FG2 381 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 INSM2Q96T92 566 aaPredicted RBP4.66□□□□□ -1.66
UBE4A-203ENST00000545354 DUSP23Q9BVJ7 150 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 NUDT9Q9BW91 350 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 LRRC3Q9BY71 257 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 SMG9Q9H0W8 520 aaKnown RBP4.66□□□□□ -1.66
UBE4A-203ENST00000545354 S1PR5Q9H228 398 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 MFSD1Q9H3U5 465 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 SRMSQ9H3Y6 488 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 ZNF395Q9H8N7 513 aaPredicted RBP4.66□□□□□ -1.66
UBE4A-203ENST00000545354 ACTR8Q9H981 624 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 TAF9BQ9HBM6 251 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 GALNT9Q9HCQ5 603 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 MMP26Q9NRE1 261 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 UQCC1Q9NVA1 299 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 BET1LQ9NYM9 111 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 OR5AC2Q9NZP5 309 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 DKK4Q9UBT3 224 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 EMCNQ9ULC0 261 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 SLIT3O75094 1523 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 TECPR2O15040 1411 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 LTBP3Q9NS15 1303 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 KIAA1551Q9HCM1 1747 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 LOC105369274A0A096LPK9 316 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 LOC102723532A0A0G2JNH3 316 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 IGLON5A6NGN9 336 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 TVP23AA6NH52 213 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 FIGNL2A6NMB9 653 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 ISM1B1AKI9 464 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 MFNGO00587 321 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 AQP7O14520 342 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 FFAR3O14843 346 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 PLA2G10O15496 165 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 GPR42O15529 346 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 SYNGR3O43761 229 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 YIF1AO95070 293 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 MPIG6BO95866 241 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 CSN2P05814 226 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 TMEM225BP0DP42 221 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 RAP2AP10114 183 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 IL2RBP14784 551 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 FUT3P21217 361 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 MMP11P24347 488 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 GABRR2P28476 465 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 SSTR1P30872 391 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 SOX18P35713 384 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 RPL29P47914 159 aaKnown RBP4.66□□□□□ -1.66
UBE4A-203ENST00000545354 PXNP49023 591 aaPredicted RBP4.66□□□□□ -1.66
UBE4A-203ENST00000545354 SLC35A2P78381 396 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 H3F3AP84243 136 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 UBE2V2Q15819 145 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 PRICKLE4Q2TBC4 344 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 ARHGAP15Q53QZ3 475 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 KHDC3LQ587J8 217 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 C22orf42Q6IC83 251 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 FAHD1Q6P587 224 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 ALKAL2Q6UX46 152 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 COX15Q7KZN9 410 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 Q7L0L9 218 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 SPRED2Q7Z698 418 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 SLC47A2Q86VL8 602 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 TNS4Q8IZW8 715 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 ZNF444Q8N0Y2 327 aaPredicted RBP4.66□□□□□ -1.66
UBE4A-203ENST00000545354 OR4N4Q8N0Y3 316 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 SYS1Q8N2H4 156 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 TCTEX1D1Q8N7M0 179 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 PNPLA1Q8N8W4 532 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 CHST4Q8NCG5 386 aa4.66□□□□□ -1.66
UBE4A-203ENST00000545354 SDR9C7Q8NEX9 313 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms