RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 OR8B4Q96RC9 309 aa15.88■□□□□ 0.13
RAB40C-205ENST00000539661 ZFYVE21Q9BQ24 234 aa15.88■□□□□ 0.13
RAB40C-205ENST00000539661 CRISPLD2Q9H0B8 497 aa15.88■□□□□ 0.13
RAB40C-205ENST00000539661 RNF122Q9H9V4 155 aa15.88■□□□□ 0.13
RAB40C-205ENST00000539661 TREM1Q9NP99 234 aa15.88■□□□□ 0.13
RAB40C-205ENST00000539661 FARSAQ9Y285 508 aaKnown RBP15.88■□□□□ 0.13
RAB40C-205ENST00000539661 LINC01387J3KSC0 135 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 LDLRAD4O15165 306 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 FOXS1O43638 330 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 DCNP07585 359 aaKnown RBP15.87■□□□□ 0.13
RAB40C-205ENST00000539661 PAX6P26367 422 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 ARRB1P49407 418 aaPredicted RBP15.87■□□□□ 0.13
RAB40C-205ENST00000539661 ADAM8P78325 824 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 AIMP2Q13155 320 aaKnown RBP15.87■□□□□ 0.13
RAB40C-205ENST00000539661 PLEKHN1Q494U1 663 aaPredicted RBP15.87■□□□□ 0.13
RAB40C-205ENST00000539661 ASPHD2Q6ICH7 369 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 PRSS41Q7RTY9 318 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 VSTM2LQ96N03 204 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 KLK13Q9UKR3 277 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 DHDHQ9UQ10 334 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 CD2P06729 351 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 CRHP06850 196 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 ASAH2BP0C7U1 165 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 ZNF28P17035 718 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 IL13RA1P78552 427 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 GPR18Q14330 331 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 SLC17A1Q14916 467 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 MESTQ5EB52 335 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 RNASE10Q5GAN6 216 aaKnown RBP15.87■□□□□ 0.13
RAB40C-205ENST00000539661 TEX30Q5JUR7 227 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 WBP2NLQ6ICG8 309 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 DGAT2L6Q6ZPD8 337 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 C10orf53Q8N6V4 93 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 MRPL43Q8N983 215 aaKnown RBP15.87■□□□□ 0.13
RAB40C-205ENST00000539661 PLPP7Q8NBV4 271 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 OR5T3Q8NGG3 340 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 BADQ92934 168 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 CST11Q9H112 138 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 MMP25Q9NPA2 562 aa15.87■□□□□ 0.13
RAB40C-205ENST00000539661 A0A1W2PPC1 479 aa15.86■□□□□ 0.13
RAB40C-205ENST00000539661 MEGF11A6BM72 1044 aa15.86■□□□□ 0.13
RAB40C-205ENST00000539661 OTOL1A6NHN0 477 aaPredicted RBP15.86■□□□□ 0.13
RAB40C-205ENST00000539661 EIF3GO75821 320 aaKnown RBP eCLIP15.86■□□□□ 0.13
RAB40C-205ENST00000539661 PGAM2P15259 253 aa15.86■□□□□ 0.13
RAB40C-205ENST00000539661 IGFBP3P17936 291 aaPredicted RBP15.86■□□□□ 0.13
RAB40C-205ENST00000539661 ADPRHP54922 357 aa15.86■□□□□ 0.13
RAB40C-205ENST00000539661 RAB5BP61020 215 aa15.86■□□□□ 0.13
RAB40C-205ENST00000539661 RPS21P63220 83 aaKnown RBP15.86■□□□□ 0.13
RAB40C-205ENST00000539661 SRSF3P84103 164 aaKnown RBP15.86■□□□□ 0.13
RAB40C-205ENST00000539661 CYCSP99999 105 aaKnown RBP15.86■□□□□ 0.13
RAB40C-205ENST00000539661 FAM109BQ6ICB4 259 aaPredicted RBP15.86■□□□□ 0.13
RAB40C-205ENST00000539661 CACUL1Q86Y37 369 aa15.86■□□□□ 0.13
RAB40C-205ENST00000539661 PAQR4Q8N4S7 273 aaPredicted RBP15.86■□□□□ 0.13
RAB40C-205ENST00000539661 ELP5Q8TE02 316 aa15.86■□□□□ 0.13
RAB40C-205ENST00000539661 RNF128Q8TEB7 428 aa15.86■□□□□ 0.13
RAB40C-205ENST00000539661 ELOVL3Q9HB03 270 aa15.86■□□□□ 0.13
RAB40C-205ENST00000539661 CHMP1AQ9HD42 196 aaPredicted RBP15.86■□□□□ 0.13
RAB40C-205ENST00000539661 Q9N2J8 555 aa15.86■□□□□ 0.13
RAB40C-205ENST00000539661 TBC1D29Q9UFV1 150 aa15.86■□□□□ 0.13
RAB40C-205ENST00000539661 MRPS23Q9Y3D9 190 aaKnown RBP15.86■□□□□ 0.13
RAB40C-205ENST00000539661 DOCK9Q9BZ29 2069 aa15.86■□□□□ 0.13
RAB40C-205ENST00000539661 KNL1Q8NG31 2342 aa15.86■□□□□ 0.13
RAB40C-205ENST00000539661 FAM25EA8MYX2 175 aa15.86■□□□□ 0.13
RAB40C-205ENST00000539661 H0YGG7 62 aa15.86■□□□□ 0.13
RAB40C-205ENST00000539661 H3BSH0 61 aa15.86■□□□□ 0.13
RAB40C-205ENST00000539661 SMAD9O15198 467 aaKnown RBP15.86■□□□□ 0.13
RAB40C-205ENST00000539661 RAB38P57729 211 aa15.86■□□□□ 0.13
RAB40C-205ENST00000539661 ARF3P61204 181 aaPredicted RBP15.86■□□□□ 0.13
RAB40C-205ENST00000539661 TMEM184AQ6ZMB5 413 aa15.86■□□□□ 0.13
RAB40C-205ENST00000539661 NUP54Q7Z3B4 507 aa15.86■□□□□ 0.13
RAB40C-205ENST00000539661 TAF8Q7Z7C8 310 aa15.86■□□□□ 0.13
RAB40C-205ENST00000539661 ATG4DQ86TL0 474 aaPredicted RBP15.86■□□□□ 0.13
RAB40C-205ENST00000539661 TSPAN32Q96QS1 320 aa15.86■□□□□ 0.13
RAB40C-205ENST00000539661 OR2M4Q96R27 311 aa15.86■□□□□ 0.13
RAB40C-205ENST00000539661 APOOQ9BUR5 198 aa15.86■□□□□ 0.13
RAB40C-205ENST00000539661 NMES1Q9C002 83 aa15.86■□□□□ 0.13
RAB40C-205ENST00000539661 PRMT8Q9NR22 394 aaPredicted RBP15.86■□□□□ 0.13
RAB40C-205ENST00000539661 EDARQ9UNE0 448 aa15.86■□□□□ 0.13
RAB40C-205ENST00000539661 VPS13AQ96RL7 3174 aa15.86■□□□□ 0.13
RAB40C-205ENST00000539661 DUS4LO95620 317 aaKnown RBP15.85■□□□□ 0.13
RAB40C-205ENST00000539661 ADH1BP00325 375 aa15.85■□□□□ 0.13
RAB40C-205ENST00000539661 ACAA1P09110 424 aaPredicted RBP15.85■□□□□ 0.13
RAB40C-205ENST00000539661 CX3CR1P49238 355 aa15.85■□□□□ 0.13
RAB40C-205ENST00000539661 POLR2GP62487 172 aaKnown RBP eCLIP15.85■□□□□ 0.13
RAB40C-205ENST00000539661 GLYATL3Q5SZD4 288 aa15.85■□□□□ 0.13
RAB40C-205ENST00000539661 ZNF679Q8IYX0 411 aa15.85■□□□□ 0.13
RAB40C-205ENST00000539661 OR6S1Q8NH40 331 aa15.85■□□□□ 0.13
RAB40C-205ENST00000539661 SAT2Q96F10 170 aaPredicted RBP15.85■□□□□ 0.13
RAB40C-205ENST00000539661 MOGAT1Q96PD6 335 aa15.85■□□□□ 0.13
RAB40C-205ENST00000539661 RCC2Q9P258 522 aaKnown RBP15.85■□□□□ 0.13
RAB40C-205ENST00000539661 MUC3AQ02505 3323 aa15.85■□□□□ 0.13
RAB40C-205ENST00000539661 WDR87Q6ZQQ6 2873 aa15.85■□□□□ 0.13
RAB40C-205ENST00000539661 DBX1A6NMT0 343 aa15.85■□□□□ 0.13
RAB40C-205ENST00000539661 FAM157CP0CG43 387 aa15.85■□□□□ 0.13
RAB40C-205ENST00000539661 RAB6AP20340 208 aa15.85■□□□□ 0.13
RAB40C-205ENST00000539661 C5AR1P21730 350 aa15.85■□□□□ 0.13
RAB40C-205ENST00000539661 IGFALSP35858 605 aa15.85■□□□□ 0.13
RAB40C-205ENST00000539661 VIPR2P41587 438 aa15.85■□□□□ 0.13
RAB40C-205ENST00000539661 SKP1P63208 163 aa15.85■□□□□ 0.13
RAB40C-205ENST00000539661 PEA15Q15121 130 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms