RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 CMKLR1Q99788 373 aa16.03■□□□□ 0.16
GNE-204ENST00000539208 GAREM1Q9H706 876 aa16.03■□□□□ 0.16
GNE-204ENST00000539208 DIABLOQ9NR28 239 aa16.03■□□□□ 0.16
GNE-204ENST00000539208 NXT1Q9UKK6 140 aaKnown RBP16.03■□□□□ 0.16
GNE-204ENST00000539208 GTF2A1LQ9UNN4 478 aa16.03■□□□□ 0.16
GNE-204ENST00000539208 ALPK2Q86TB3 2170 aa16.03■□□□□ 0.16
GNE-204ENST00000539208 ZNF780AO75290 641 aaPredicted RBP16.03■□□□□ 0.16
GNE-204ENST00000539208 CTAG2O75638 210 aa16.03■□□□□ 0.16
GNE-204ENST00000539208 PLA2G7Q13093 441 aa16.03■□□□□ 0.16
GNE-204ENST00000539208 DCXRQ7Z4W1 244 aa16.03■□□□□ 0.16
GNE-204ENST00000539208 IFI44Q8TCB0 444 aa16.03■□□□□ 0.16
GNE-204ENST00000539208 ELP5Q8TE02 316 aa16.03■□□□□ 0.16
GNE-204ENST00000539208 PIGKQ92643 395 aa16.03■□□□□ 0.16
GNE-204ENST00000539208 FAM3DQ96BQ1 224 aa16.03■□□□□ 0.16
GNE-204ENST00000539208 SPACA9Q96E40 222 aaPredicted RBP16.03■□□□□ 0.16
GNE-204ENST00000539208 UTP23Q9BRU9 249 aaKnown RBP16.03■□□□□ 0.16
GNE-204ENST00000539208 DEFB126Q9BYW3 111 aa16.03■□□□□ 0.16
GNE-204ENST00000539208 G6PC2Q9NQR9 355 aa16.03■□□□□ 0.16
GNE-204ENST00000539208 MED29Q9NX70 200 aa16.03■□□□□ 0.16
GNE-204ENST00000539208 CDV3Q9UKY7 258 aaKnown RBP16.03■□□□□ 0.16
GNE-204ENST00000539208 MEIKINA0A087WXM9 373 aa16.02■□□□□ 0.16
GNE-204ENST00000539208 LOC102723996A0A087X1L8 192 aa16.02■□□□□ 0.16
GNE-204ENST00000539208 LOC100289279A0A1B0GTE1 492 aa16.02■□□□□ 0.16
GNE-204ENST00000539208 A0A1B0GVI7 797 aa16.02■□□□□ 0.16
GNE-204ENST00000539208 GGT3PA6NGU5 568 aa16.02■□□□□ 0.16
GNE-204ENST00000539208 H3BML4 177 aa16.02■□□□□ 0.16
GNE-204ENST00000539208 H3BSH0 61 aa16.02■□□□□ 0.16
GNE-204ENST00000539208 ACHEP22303 614 aa16.02■□□□□ 0.16
GNE-204ENST00000539208 POU3F4P49335 361 aa16.02■□□□□ 0.16
GNE-204ENST00000539208 MYBPHQ13203 477 aa16.02■□□□□ 0.16
GNE-204ENST00000539208 BTBD16Q32M84 506 aa16.02■□□□□ 0.16
GNE-204ENST00000539208 C2orf76Q3KRA6 126 aa16.02■□□□□ 0.16
GNE-204ENST00000539208 PHF19Q5T6S3 580 aa16.02■□□□□ 0.16
GNE-204ENST00000539208 PEAR1Q5VY43 1037 aaPredicted RBP16.02■□□□□ 0.16
GNE-204ENST00000539208 GLT8D1Q68CQ7 371 aa16.02■□□□□ 0.16
GNE-204ENST00000539208 ZNF704Q6ZNC4 412 aaPredicted RBP16.02■□□□□ 0.16
GNE-204ENST00000539208 CREB3L2Q70SY1 520 aa16.02■□□□□ 0.16
GNE-204ENST00000539208 OR2M3Q8NG83 312 aa16.02■□□□□ 0.16
GNE-204ENST00000539208 RASL10BQ96S79 203 aa16.02■□□□□ 0.16
GNE-204ENST00000539208 MRPL13Q9BYD1 178 aaKnown RBP16.02■□□□□ 0.16
GNE-204ENST00000539208 PRMT8Q9NR22 394 aaPredicted RBP16.02■□□□□ 0.16
GNE-204ENST00000539208 B3GAT1Q9P2W7 334 aa16.02■□□□□ 0.16
GNE-204ENST00000539208 ZNF222Q9UK12 451 aa16.02■□□□□ 0.16
GNE-204ENST00000539208 HHLA2Q9UM44 414 aa16.02■□□□□ 0.16
GNE-204ENST00000539208 IGKV1D-43A0A0B4J1Z2 117 aa16.02■□□□□ 0.15
GNE-204ENST00000539208 A0A1W2PQ72 361 aa16.02■□□□□ 0.15
GNE-204ENST00000539208 MEGF11A6BM72 1044 aa16.02■□□□□ 0.15
GNE-204ENST00000539208 SHISA8B8ZZ34 492 aa16.02■□□□□ 0.15
GNE-204ENST00000539208 H7C417 338 aa16.02■□□□□ 0.15
GNE-204ENST00000539208 GPR85P60893 370 aa16.02■□□□□ 0.15
GNE-204ENST00000539208 PIAS4Q8N2W9 510 aaPredicted RBP16.02■□□□□ 0.15
GNE-204ENST00000539208 C9orf62Q8N4C0 152 aa16.02■□□□□ 0.15
GNE-204ENST00000539208 RNF133Q8WVZ7 376 aa16.02■□□□□ 0.15
GNE-204ENST00000539208 SLC25A28Q96A46 364 aa16.02■□□□□ 0.15
GNE-204ENST00000539208 MED30Q96HR3 178 aa16.02■□□□□ 0.15
GNE-204ENST00000539208 ZFP64Q9NPA5 681 aa16.02■□□□□ 0.15
GNE-204ENST00000539208 TAS2R8Q9NYW2 309 aa16.02■□□□□ 0.15
GNE-204ENST00000539208 MTFP1Q9UDX5 166 aa16.02■□□□□ 0.15
GNE-204ENST00000539208 OR52A1Q9UKL2 312 aa16.02■□□□□ 0.15
GNE-204ENST00000539208 EMC9Q9Y3B6 208 aa16.02■□□□□ 0.15
GNE-204ENST00000539208 ASCC3Q8N3C0 2202 aaKnown RBP16.01■□□□□ 0.15
GNE-204ENST00000539208 A0A1B0GUH1 482 aa16.01■□□□□ 0.15
GNE-204ENST00000539208 RAD1O60671 282 aa16.01■□□□□ 0.15
GNE-204ENST00000539208 RBBP9O75884 186 aa16.01■□□□□ 0.15
GNE-204ENST00000539208 CXCL3P19876 107 aa16.01■□□□□ 0.15
GNE-204ENST00000539208 FKBP2P26885 142 aaKnown RBP16.01■□□□□ 0.15
GNE-204ENST00000539208 BIDP55957 195 aa16.01■□□□□ 0.15
GNE-204ENST00000539208 METTL11BQ5VVY1 283 aa16.01■□□□□ 0.15
GNE-204ENST00000539208 C3orf33Q6P1S2 294 aa16.01■□□□□ 0.15
GNE-204ENST00000539208 LUZP2Q86TE4 346 aa16.01■□□□□ 0.15
GNE-204ENST00000539208 OR1J4Q8NGS1 313 aa16.01■□□□□ 0.15
GNE-204ENST00000539208 RBP7Q96R05 134 aa16.01■□□□□ 0.15
GNE-204ENST00000539208 AKIRIN1Q9H9L7 192 aaPredicted RBP16.01■□□□□ 0.15
GNE-204ENST00000539208 PI4KAP42356 2102 aa16.01■□□□□ 0.15
GNE-204ENST00000539208 CIB4A0PJX0 185 aa16■□□□□ 0.15
GNE-204ENST00000539208 PTHLHP12272 177 aa16■□□□□ 0.15
GNE-204ENST00000539208 DCTDP32321 178 aa16■□□□□ 0.15
GNE-204ENST00000539208 MMP16P51512 607 aa16■□□□□ 0.15
GNE-204ENST00000539208 MECP2P51608 486 aaKnown RBP16■□□□□ 0.15
GNE-204ENST00000539208 EFNB2P52799 333 aa16■□□□□ 0.15
GNE-204ENST00000539208 SNTA1Q13424 505 aa16■□□□□ 0.15
GNE-204ENST00000539208 PCOLCEQ15113 449 aa16■□□□□ 0.15
GNE-204ENST00000539208 THEM4Q5T1C6 240 aa16■□□□□ 0.15
GNE-204ENST00000539208 TMEM244Q5VVB8 128 aa16■□□□□ 0.15
GNE-204ENST00000539208 SEZ6L2Q6UXD5 910 aa16■□□□□ 0.15
GNE-204ENST00000539208 FADS6Q8N9I5 356 aa16■□□□□ 0.15
GNE-204ENST00000539208 HSPB11Q9Y547 144 aa16■□□□□ 0.15
GNE-204ENST00000539208 NPTNQ9Y639 398 aa16■□□□□ 0.15
GNE-204ENST00000539208 TRIOBPQ9H2D6 2365 aa16■□□□□ 0.15
GNE-204ENST00000539208 A6NL46 340 aa16■□□□□ 0.15
GNE-204ENST00000539208 AKR7A2O43488 359 aa16■□□□□ 0.15
GNE-204ENST00000539208 ADH6P28332 368 aa16■□□□□ 0.15
GNE-204ENST00000539208 P2RY4P51582 365 aa16■□□□□ 0.15
GNE-204ENST00000539208 TRA2AQ13595 282 aaKnown RBP eCLIP16■□□□□ 0.15
GNE-204ENST00000539208 ZNF239Q16600 458 aaKnown RBP16■□□□□ 0.15
GNE-204ENST00000539208 SLC25A44Q96H78 314 aaPredicted RBP16■□□□□ 0.15
GNE-204ENST00000539208 NOX3Q9HBY0 568 aa16■□□□□ 0.15
GNE-204ENST00000539208 NKIRAS2Q9NYR9 191 aa16■□□□□ 0.15
GNE-204ENST00000539208 TAS2R4Q9NYW5 299 aa16■□□□□ 0.15
GNE-204ENST00000539208 FLVCR2Q9UPI3 526 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms