RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 NXT1Q9UKK6 140 aaKnown RBP9.14□□□□□ -0.95
COL4A6-208ENST00000538570 PIGLQ9Y2B2 252 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 A3GALT2U3KPV4 340 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 SLC16A6O15403 523 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 TBX19O60806 448 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 GLCEO94923 617 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 TTRP02766 147 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 GIPP09681 153 aaPredicted RBP9.14□□□□□ -0.95
COL4A6-208ENST00000538570 MTHFD2P13995 350 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 CTRB1P17538 263 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 SRP9P49458 86 aaKnown RBP9.14□□□□□ -0.95
COL4A6-208ENST00000538570 EDDM3BP56851 147 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 CTRB2Q6GPI1 263 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 PRR27Q6MZM9 219 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 C19orf35Q6ZS72 473 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 ZNF534Q76KX8 674 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 CDH26Q8IXH8 852 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 LSMEM2Q8N112 164 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 L3MBTL4Q8NA19 623 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 KDF1Q8NAX2 398 aaPredicted RBP9.14□□□□□ -0.95
COL4A6-208ENST00000538570 PLPP7Q8NBV4 271 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 SFT2D1Q8WV19 159 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 FGF13Q92913 245 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 PIGTQ969N2 578 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 COL2A1P02458 1487 aaPredicted RBP9.14□□□□□ -0.95
COL4A6-208ENST00000538570 HOXD9P28356 352 aaPredicted RBP9.14□□□□□ -0.95
COL4A6-208ENST00000538570 EIF1P41567 113 aaKnown RBP9.14□□□□□ -0.95
COL4A6-208ENST00000538570 HAGHQ16775 308 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 COX20Q5RI15 118 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 SLCO4C1Q6ZQN7 724 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 ZNF383Q8NA42 475 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 TM4SF18Q96CE8 201 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 NIPSNAP1Q9BPW8 284 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 MS4A8Q9BY19 250 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 C20orf27Q9GZN8 174 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 TAS2R5Q9NYW4 299 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 DNMT3BQ9UBC3 853 aaKnown RBP9.14□□□□□ -0.95
COL4A6-208ENST00000538570 USP3Q9Y6I4 520 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 A0A1B0GV72 72 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 C4orf47A7E2U8 309 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 MAP2K6P52564 334 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 TEKQ02763 1124 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 TAS1R1Q7RTX1 841 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 AGBL5Q8NDL9 886 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 OR8U1Q8NH10 309 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 GPR78Q96P69 363 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 RYDENQ9NUL5 291 aaKnown RBP9.14□□□□□ -0.95
COL4A6-208ENST00000538570 BET1LQ9NYM9 111 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 A0A0B4J203 849 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 MBLAC1A4D2B0 266 aaPredicted RBP9.14□□□□□ -0.95
COL4A6-208ENST00000538570 SELENOFO60613 162 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 LIPAP38571 399 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 MRPS21P82921 87 aaKnown RBP9.14□□□□□ -0.95
COL4A6-208ENST00000538570 DMWDQ09019 674 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 TBC1D28Q2M2D7 210 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 OR8G2PQ6IF36 304 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 EMG1Q92979 244 aaKnown RBP9.14□□□□□ -0.95
COL4A6-208ENST00000538570 REEP6Q96HR9 211 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 KCNJ15Q99712 375 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 BARHL1Q9BZE3 327 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 AMBRA1Q9C0C7 1298 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 TMEM38AQ9H6F2 299 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 SLCO1B1Q9Y6L6 691 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 MYH15Q9Y2K3 1946 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 A0A0A6YYJ9 748 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 CD14P08571 375 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 RPA2P15927 270 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 KRTDAPP60985 99 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 H3F3AP84243 136 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 FABP9Q0Z7S8 132 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 H2BFWTQ7Z2G1 175 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 OR6K3Q8NGY3 331 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 LKAAEAR1Q8TD35 194 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 BLNKQ8WV28 456 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 UCN3Q969E3 161 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 SMIM12Q96EX1 92 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 PDCD1LG2Q9BQ51 273 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 GLIPR2Q9H4G4 154 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 GNB4Q9HAV0 340 aa9.14□□□□□ -0.95
COL4A6-208ENST00000538570 OR2A25A4D2G3 310 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 B4E171 279 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 WNT11O96014 354 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 RAB5AP20339 215 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 DUSP1P28562 367 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 LGALS4P56470 323 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 SNRPGP62308 76 aaKnown RBP9.13□□□□□ -0.95
COL4A6-208ENST00000538570 KCTD11Q693B1 232 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 KDM4DQ6B0I6 523 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 TEX261Q6UWH6 196 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 DCXRQ7Z4W1 244 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 BCDIN3DQ7Z5W3 292 aaKnown RBP9.13□□□□□ -0.95
COL4A6-208ENST00000538570 LMNTD1Q8N9Z9 388 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 OR6C1Q96RD1 312 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 LIN7CQ9NUP9 197 aaKnown RBP9.13□□□□□ -0.95
COL4A6-208ENST00000538570 U3KQ87 197 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 RAB27BO00194 218 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 DEGS1O15121 323 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 RRADP55042 308 aa9.13□□□□□ -0.95
COL4A6-208ENST00000538570 ELLP55199 621 aaPredicted RBP9.13□□□□□ -0.95
COL4A6-208ENST00000538570 MORN1Q5T089 497 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms