RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 RNF13O43567 381 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 MRPL33O75394 65 aaKnown RBP7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 UPK3AO75631 287 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 SERPINI2O75830 405 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 NDUFB2O95178 105 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 OR6A2O95222 327 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 TXNDC12O95881 172 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 HIST1H2ABP04908 130 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 CD14P08571 375 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 IGFBP1P08833 259 aaPredicted RBP7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 POU2F1P14859 743 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 PRKACGP22612 351 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 AHCYP23526 432 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 BIDP55957 195 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 PRPS1P60891 318 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 PPP2R2BQ00005 443 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 C1DQ13901 141 aaKnown RBP7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 HIST3H3Q16695 136 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 RFX4Q33E94 735 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 MESTQ5EB52 335 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 PHYHD1Q5SRE7 291 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 NIPAL3Q6P499 406 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 SMARCD3Q6STE5 483 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 KLHL17Q6TDP4 642 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 Q6ZT83 130 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 HIST3H2AQ7L7L0 130 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 HIPK1Q86Z02 1210 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 PQLC1Q8N2U9 271 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 OR6X1Q8NH79 312 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 HIST1H2ACQ93077 130 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 RNASE6Q93091 150 aaKnown RBP7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 TMEM54Q969K7 222 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 APH1AQ96BI3 265 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 SAMD8Q96LT4 415 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 MRI1Q9BV20 369 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 KATNB1Q9BVA0 655 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 MRPL13Q9BYD1 178 aaKnown RBP7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 LINC00470Q9BZP3 86 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 SEMA6AQ9H2E6 1030 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 KLK15Q9H2R5 256 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 SLCO5A1Q9H2Y9 848 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 TXNIPQ9H3M7 391 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 EGLN3Q9H6Z9 239 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 IL20RAQ9UHF4 553 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 ADAM18Q9Y3Q7 739 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 KLF2Q9Y5W3 355 aaPredicted RBP7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 CACNA1CQ13936 2221 aa7.66□□□□□ -1.18
CCDC90B-217ENST00000530253 CSMD2Q7Z408 3487 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 A0A1W2PRG6 482 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 SAC3D1A6NKF1 404 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 RPL36A-HNRNPH2H7BZ11 118 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 BHLHE40O14503 412 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 ARPC3O15145 178 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 TRMUO75648 421 aaKnown RBP7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 SOX14O95416 240 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 PPP1R3DO95685 299 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 IGHV3-9P01782 118 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 ITGA5P08648 1049 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 PGA4P0DJD7 388 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 PGA3P0DJD8 388 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 APEHP13798 732 aaKnown RBP7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 ANXA8P13928 327 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 GSTM3P21266 225 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 IGHV1-2P23083 117 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 CD79BP40259 229 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 DAPP51397 102 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 DAP3P51398 398 aaKnown RBP7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 ZNF133P52736 654 aaPredicted RBP7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 CTXN1P60606 82 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 RPL27P61353 136 aaKnown RBP7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 ERVK-25P63136 954 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 IL1RL1Q01638 556 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 CAMK2DQ13557 499 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 TAF11Q15544 211 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 CT83Q5H943 113 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 FBXW9Q5XUX1 488 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 KDM4DQ6B0I6 523 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 STAC2Q6ZMT1 411 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 DPY19L2P2Q6ZN68 376 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 C20orf196Q8IYI0 205 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 C10orf67Q8IYJ2 551 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 SVOPLQ8N434 492 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 ARIH2OSQ8N7S6 290 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 NOXO1Q8NFA2 376 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 OR4Q3Q8NH05 313 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 HDAC2Q92769 488 aaKnown RBP7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 Q96M85 177 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 ADAD1Q96M93 576 aaKnown RBP7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 ALKBH3Q96Q83 286 aaPredicted RBP7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 RBM24Q9BX46 236 aaKnown RBP7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 POLDIP3Q9BY77 421 aaKnown RBP7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 SMURF2Q9HAU4 748 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 KCNJ16Q9NPI9 418 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 PKDREJQ9NTG1 2253 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 IL20Q9NYY1 176 aa7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 ZNF346Q9UL40 294 aaKnown RBP7.65□□□□□ -1.18
CCDC90B-217ENST00000530253 IGKV1D-43A0A0B4J1Z2 117 aa7.64□□□□□ -1.19
CCDC90B-217ENST00000530253 TEX13CA0A0J9YWL9 993 aa7.64□□□□□ -1.19
CCDC90B-217ENST00000530253 OR6C65A6NJZ3 312 aa7.64□□□□□ -1.19
CCDC90B-217ENST00000530253 CENPBD1B2RD01 187 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms