RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 AKR7LQ8NHP1 331 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 FNDC8Q8TC99 324 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 MAIP1Q8WWC4 291 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 PSMF1Q92530 271 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 PIGCQ92535 297 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 TAF15Q92804 592 aaKnown RBP eCLIP3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 AMDHD1Q96NU7 426 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 PARD6BQ9BYG5 372 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 FGFBP2Q9BYJ0 223 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 METTL17Q9H7H0 456 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 EXOSC3Q9NQT5 275 aaKnown RBP3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 NUDT15Q9NV35 164 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 SMOXQ9NWM0 555 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 RAB20Q9NX57 234 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 EHFQ9NZC4 300 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 PTBP2Q9UKA9 531 aaKnown RBP3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 GAB2Q9UQC2 676 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 TMED5Q9Y3A6 229 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 FAM215AQ9Y5M1 114 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 ABCA13Q86UQ4 5058 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 IGLV4-3A0A075B6K6 122 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 OR52A4PA6NMU1 304 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 CDC7O00311 574 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 NR5A2O00482 541 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 OR2B3O76000 313 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 TROVE2P10155 538 aaKnown RBP eCLIP3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 POU2F1P14859 743 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 ACADSP16219 412 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 IMPDH1P20839 514 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 CXCR2P25025 360 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 LAP3P28838 519 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 OR1E1P30953 314 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 GPR1P46091 355 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 RND3P61587 244 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 PLOD1Q02809 727 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 COX10Q12887 443 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 CYP51A1Q16850 503 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 ACER2Q5QJU3 275 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 CLEC2AQ6UVW9 174 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 NDUFAF7Q7L592 441 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 TAC4Q86UU9 113 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 SLC22A9Q8IVM8 553 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 BPIFB2Q8N4F0 458 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 MDS2Q8NDY4 140 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 FAM83FQ8NEG4 500 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 OR9K2Q8NGE7 335 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 OR5D13Q8NGL4 314 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 TFB1MQ8WVM0 346 aaKnown RBP3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 DNAJA3Q96EY1 480 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 C11orf24Q96F05 449 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 ART5Q96L15 291 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 NPY6RQ99463 290 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 SLC6A7Q99884 636 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 DEFB127Q9H1M4 99 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 ZNF226Q9NYT6 803 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 SPATA7Q9P0W8 599 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 RASD1Q9Y272 281 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 OARD1Q9Y530 152 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 NPTNQ9Y639 398 aa3.77□□□□□ -1.81
HMGB1P23-201ENST00000518743 KIAA1549Q9HCM3 1950 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 MUC4Q99102 2169 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 IGHV3OR16-12A0A075B7B8 117 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 GOLGA8OA6NCC3 632 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 CCDC182A6NF36 153 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 ZNF716A6NP11 495 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 FOXI3A8MTJ6 420 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 GOLGA8NF8WBI6 632 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 K7EQG2 157 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 BCKDKO14874 412 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 POLR2DO15514 142 aaKnown RBP3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 ZFAND5O76080 213 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 CLDN9O95484 217 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 SERPINA3P01011 423 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 ZNF735P0CB33 412 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 XRCC1P18887 633 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 RPL13AP40429 203 aaKnown RBP3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 RPL34P49207 117 aaKnown RBP3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 ARHGDIAP52565 204 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 DAOAP59103 153 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 RHOAP61586 193 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 EWSR1Q01844 656 aaKnown RBP eCLIP3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 LOXL1Q08397 574 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 CALCOCO2Q13137 446 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 RCN1Q15293 331 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 CHI3L2Q15782 390 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 FBXL19-AS1Q494R0 122 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 CTSL3PQ5NE16 218 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 PRAMEF5Q5TYX0 476 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 METTL11BQ5VVY1 283 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 PRAMEF6Q5VXH4 476 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 SLC25A25Q6KCM7 469 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 ACSM5Q6NUN0 579 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 STAC2Q6ZMT1 411 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 USP43Q70EL4 1123 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 ABHD13Q7L211 337 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 SETD3Q86TU7 594 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 OOSP2Q86WS3 158 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 SNX31Q8N9S9 440 aa3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 GTF3AQ92664 365 aaKnown RBP3.76□□□□□ -1.81
HMGB1P23-201ENST00000518743 ISG20Q96AZ6 181 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms