RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 GHITMQ9H3K2 345 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 TMEM231Q9H6L2 316 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 METTL8Q9H825 291 aaKnown RBP12.14□□□□□ -0.47
GPC1-209ENST00000495100 PPP4R1LQ9P1A2 415 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 SCP2D1Q9UJQ7 156 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 PRELID1Q9Y255 219 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 DOCK10Q96BY6 2186 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 ALPK3Q96L96 1907 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 F5H5P2 479 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 SRPX2O60687 465 aaPredicted RBP12.14□□□□□ -0.47
GPC1-209ENST00000495100 TNK1Q13470 666 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 ZNF546Q86UE3 836 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 AKIRIN1Q9H9L7 192 aaPredicted RBP12.14□□□□□ -0.47
GPC1-209ENST00000495100 ZFP64Q9NPA5 681 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 RHBDD3Q9Y3P4 386 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 RNF215Q9Y6U7 377 aa12.14□□□□□ -0.47
GPC1-209ENST00000495100 COL4A4P53420 1690 aaPredicted RBP12.13□□□□□ -0.47
GPC1-209ENST00000495100 IGKV1D-42A0A075B6H8 117 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 LOC107986453A0A1B0GWG9 222 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 MED19A0JLT2 244 aaPredicted RBP12.13□□□□□ -0.47
GPC1-209ENST00000495100 LEUTXA8MZ59 168 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 ADAM10O14672 748 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 RFC3P40938 356 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 NPY4RP50391 375 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 GPR85P60893 370 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 HNRNPKP61978 463 aaKnown RBP eCLIP12.13□□□□□ -0.47
GPC1-209ENST00000495100 RAET1LQ5VY80 246 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 GALNT6Q8NCL4 622 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 OR4K17Q8NGC6 315 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 GPBAR1Q8TDU6 330 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 SLC41A2Q96JW4 573 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 RBP7Q96R05 134 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 FOXJ3Q9UPW0 622 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 SHANK1Q9Y566 2161 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 E9PQ18 207 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 C5orf67F2Z3F1 127 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 CRTAPO75718 401 aaPredicted RBP12.13□□□□□ -0.47
GPC1-209ENST00000495100 WDPCPO95876 746 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 PRKACBP22694 351 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 HTR2CP28335 458 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 MMP15P51511 669 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 RPS11P62280 158 aaKnown RBP eCLIP12.13□□□□□ -0.47
GPC1-209ENST00000495100 C19orf57Q0VDD7 668 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 SMUG1Q53HV7 270 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 RTN4RL2Q86UN3 420 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 OR51E1Q8TCB6 317 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 CCDC74AQ96AQ1 378 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 CRB3Q9BUF7 120 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 MOKQ9UQ07 419 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 KIAA2026Q5HYC2 2103 aa12.13□□□□□ -0.47
GPC1-209ENST00000495100 A0A1W2PP11 408 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 ZNF726A6NNF4 738 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 GABARAPH6UMI1 98 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 TNFRSF10CO14798 259 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 HOXB5P09067 269 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 OR3A2P47893 321 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 LUMP51884 338 aaPredicted RBP12.12□□□□□ -0.47
GPC1-209ENST00000495100 MRPS21P82921 87 aaKnown RBP12.12□□□□□ -0.47
GPC1-209ENST00000495100 EGR4Q05215 589 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 MOGAT2Q3SYC2 334 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 FAM57BQ71RH2 274 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 Q7L0L9 218 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 TMEM17Q86X19 198 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 STEAP2Q8NFT2 490 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 STT3BQ8TCJ2 826 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 ALKBH4Q9NXW9 302 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 OBP2AQ9NY56 170 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 ASH2LQ9UBL3 628 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 NSA2O95478 260 aaKnown RBP12.12□□□□□ -0.47
GPC1-209ENST00000495100 SMIM10L1P0DMW3 83 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 ZNF41P51814 821 aaPredicted RBP12.12□□□□□ -0.47
GPC1-209ENST00000495100 CD276Q5ZPR3 534 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 RAB12Q6IQ22 244 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 GALNT16Q8N428 558 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 ZBTB44Q8NCP5 570 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 OR1J2Q8NGS2 313 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 SMIM10Q96HG1 83 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 KCNJ15Q99712 375 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 SOX7Q9BT81 388 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 PTGES2Q9H7Z7 377 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 KCNN3Q9UGI6 736 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 SCML1Q9UN30 329 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 TMEM14AQ9Y6G1 99 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 KIF26AQ9ULI4 1882 aaPredicted RBP12.12□□□□□ -0.47
GPC1-209ENST00000495100 TMEM82A0PJX8 343 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 ECDO95905 644 aaPredicted RBP12.12□□□□□ -0.47
GPC1-209ENST00000495100 CD34P28906 385 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 NUP62P37198 522 aaPredicted RBP12.12□□□□□ -0.47
GPC1-209ENST00000495100 ZP1P60852 638 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 SERTAD2Q14140 314 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 CDONQ4KMG0 1287 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 CDCP2Q5VXM1 449 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 PAPD4Q6PIY7 484 aaKnown RBP12.12□□□□□ -0.47
GPC1-209ENST00000495100 RTL10Q7L3V2 364 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 TRAPPC6BQ86SZ2 158 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 TMEM156Q8N614 296 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 TOMM40LQ969M1 308 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 LMF2Q9BU23 707 aaKnown RBP12.12□□□□□ -0.47
GPC1-209ENST00000495100 VN1R1Q9GZP7 353 aa12.12□□□□□ -0.47
GPC1-209ENST00000495100 LRP12Q9Y561 859 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms