RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 CDH20Q9HBT6 801 aa8.3□□□□□ -1.08
TMEM39A-210ENST00000490099 HINT3Q9NQE9 182 aaKnown RBP8.3□□□□□ -1.08
TMEM39A-210ENST00000490099 ARL8BQ9NVJ2 186 aa8.3□□□□□ -1.08
TMEM39A-210ENST00000490099 SLCO1C1Q9NYB5 712 aa8.3□□□□□ -1.08
TMEM39A-210ENST00000490099 NDUFAF4Q9P032 175 aa8.3□□□□□ -1.08
TMEM39A-210ENST00000490099 TAAR3PQ9P1P4 343 aa8.3□□□□□ -1.08
TMEM39A-210ENST00000490099 RHCGQ9UBD6 479 aa8.3□□□□□ -1.08
TMEM39A-210ENST00000490099 GPR160Q9UJ42 338 aa8.3□□□□□ -1.08
TMEM39A-210ENST00000490099 FZR1Q9UM11 496 aa8.3□□□□□ -1.08
TMEM39A-210ENST00000490099 TIMM10BQ9Y5J6 103 aa8.3□□□□□ -1.08
TMEM39A-210ENST00000490099 FBN3Q75N90 2809 aa8.3□□□□□ -1.08
TMEM39A-210ENST00000490099 TRAV27A0A087WT01 109 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 H3BSA7 217 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 WNT9BO14905 357 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 ZNF682O95780 498 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 SERPINA1P01009 418 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 SCG5P05408 212 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 SAGP10523 405 aaPredicted RBP8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 COX5BP10606 129 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 SRD5A1P18405 259 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 RHCEP18577 417 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 LAP3P28838 519 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 CRYBB2P43320 205 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 MAGEB1P43366 347 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 MMP15P51511 669 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 KLF3P57682 345 aaPredicted RBP8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 SELENOVP59797 346 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 PSME3P61289 254 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 ERVS71-1P61550 626 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 CD47Q08722 323 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 SGCAQ16586 387 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 MOGQ16653 247 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 CR1LQ2VPA4 569 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 ZBED5Q49AG3 693 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 MBNL2Q5VZF2 373 aaKnown RBP8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 C16orf89Q6UX73 402 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 ZNF730Q6ZMV8 503 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 ZNF771Q7L3S4 317 aaPredicted RBP8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 MEX3DQ86XN8 651 aaKnown RBP8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 TMEM158Q8WZ71 300 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 NSMAFQ92636 917 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 HSH2DQ96JZ2 352 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 SNX18Q96RF0 628 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 GPX7Q96SL4 187 aaPredicted RBP8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 C1orf21Q9H246 121 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 KCNN2Q9H2S1 579 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 GORASP2Q9H8Y8 452 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 NRIP3Q9NQ35 241 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 DCAF13Q9NV06 445 aaKnown RBP8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 PGPEP1Q9NXJ5 209 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 SIGLEC7Q9Y286 467 aa8.29□□□□□ -1.08
TMEM39A-210ENST00000490099 A0A1W2PPW3 197 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 PRSS37A4D1T9 235 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 RNF212BA8MTL3 300 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 C12orf71A8MTZ7 269 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 B4DSR2 109 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 TXNDC12O95881 172 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 SEMG1P04279 462 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 TUBG1P23258 451 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 APLNRP35414 380 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 OMPP47874 163 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 GDI2P50395 445 aaKnown RBP8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 NUDT2P50583 147 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 FXYD6P3P58550 94 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 PCBD1P61457 104 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 HSF2Q03933 536 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 TOP3AQ13472 1001 aaPredicted RBP8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 KRTAP24-1Q3LI83 254 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 ZNF718Q3SXZ3 478 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 DNAL1Q4LDG9 190 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 FAM209AQ5JX71 171 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 GPR139Q6DWJ6 353 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 FKBP9P1Q75LS8 142 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 IGFN1Q86VF2 1251 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 ARHGAP24Q8N264 748 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 OR1J1Q8NGS3 322 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 AKR7LQ8NHP1 331 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 CLDND2Q8NHS1 167 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 Q96M85 177 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 KCTD14Q9BQ13 255 aaPredicted RBP8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 CCNB1IP1Q9NPC3 277 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 SPAG4Q9NPE6 437 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 POLE4Q9NR33 117 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 TUBG2Q9NRH3 451 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 ZNF275Q9NSD4 429 aaPredicted RBP8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 TBCCD1Q9NVR7 557 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 CD300AQ9UGN4 299 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 TMEFF2Q9UIK5 374 aaPredicted RBP8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 RPS6KA6Q9UK32 745 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 TMEM5Q9Y2B1 443 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 ADAM18Q9Y3Q7 739 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 CUBNO60494 3623 aa8.28□□□□□ -1.08
TMEM39A-210ENST00000490099 TEX13CA0A0J9YWL9 993 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 TRBV4-1A0A0J9YWV2 114 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 C5orf49A4QMS7 147 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 ERICH4A6NGS2 130 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 B2RBV5 119 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 FAM157AC9JC47 383 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 GSTA4O15217 222 aa8.27□□□□□ -1.09
TMEM39A-210ENST00000490099 GYG2O15488 501 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms