RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 FBXO17Q96EF6 278 aa11.55□□□□□ -0.56
HDAC1-208ENST00000482310 ZNF582Q96NG8 517 aaPredicted RBP11.55□□□□□ -0.56
HDAC1-208ENST00000482310 CDADC1Q9BWV3 514 aa11.55□□□□□ -0.56
HDAC1-208ENST00000482310 TTTY10Q9BZA0 68 aa11.55□□□□□ -0.56
HDAC1-208ENST00000482310 SIAEQ9HAT2 523 aa11.55□□□□□ -0.56
HDAC1-208ENST00000482310 NPAP1Q9NZP6 1156 aa11.55□□□□□ -0.56
HDAC1-208ENST00000482310 SLC25A15Q9Y619 301 aa11.55□□□□□ -0.56
HDAC1-208ENST00000482310 COMMD3-BMI1R4GMX3 469 aa11.55□□□□□ -0.56
HDAC1-208ENST00000482310 HRNRQ86YZ3 2850 aaPredicted RBP11.55□□□□□ -0.56
HDAC1-208ENST00000482310 DCHS2Q6V1P9 2916 aa11.55□□□□□ -0.56
HDAC1-208ENST00000482310 CASKO14936 926 aa11.54□□□□□ -0.56
HDAC1-208ENST00000482310 PRODHO43272 600 aa11.54□□□□□ -0.56
HDAC1-208ENST00000482310 UBL3O95164 117 aa11.54□□□□□ -0.56
HDAC1-208ENST00000482310 COX6B1P14854 86 aa11.54□□□□□ -0.56
HDAC1-208ENST00000482310 HCCSP53701 268 aa11.54□□□□□ -0.56
HDAC1-208ENST00000482310 RAB39AQ14964 217 aa11.54□□□□□ -0.56
HDAC1-208ENST00000482310 GSG1Q2KHT4 349 aa11.54□□□□□ -0.56
HDAC1-208ENST00000482310 SLC36A2Q495M3 483 aa11.54□□□□□ -0.56
HDAC1-208ENST00000482310 LINC01590Q5TEZ4 76 aa11.54□□□□□ -0.56
HDAC1-208ENST00000482310 LCN1P1Q5VSP4 162 aa11.54□□□□□ -0.56
HDAC1-208ENST00000482310 NXNL2Q5VZ03 156 aa11.54□□□□□ -0.56
HDAC1-208ENST00000482310 SP5Q6BEB4 398 aaPredicted RBP11.54□□□□□ -0.56
HDAC1-208ENST00000482310 TMEM53Q6P2H8 277 aa11.54□□□□□ -0.56
HDAC1-208ENST00000482310 SPATC1Q76KD6 591 aa11.54□□□□□ -0.56
HDAC1-208ENST00000482310 ZNF627Q7L945 461 aa11.54□□□□□ -0.56
HDAC1-208ENST00000482310 MYPOPQ86VE0 399 aaPredicted RBP11.54□□□□□ -0.56
HDAC1-208ENST00000482310 GID4Q8IVV7 300 aa11.54□□□□□ -0.56
HDAC1-208ENST00000482310 C8orf59Q8N0T1 100 aaPredicted RBP11.54□□□□□ -0.56
HDAC1-208ENST00000482310 HSD17B8Q92506 261 aa11.54□□□□□ -0.56
HDAC1-208ENST00000482310 MS4A3Q96HJ5 214 aa11.54□□□□□ -0.56
HDAC1-208ENST00000482310 INTS14Q96SY0 518 aa11.54□□□□□ -0.56
HDAC1-208ENST00000482310 ASH2LQ9UBL3 628 aa11.54□□□□□ -0.56
HDAC1-208ENST00000482310 PLEKHB1Q9UF11 243 aaPredicted RBP11.54□□□□□ -0.56
HDAC1-208ENST00000482310 LRBAP50851 2863 aa11.54□□□□□ -0.56
HDAC1-208ENST00000482310 CACNA1DQ01668 2161 aa11.54□□□□□ -0.56
HDAC1-208ENST00000482310 CADP27708 2225 aa11.54□□□□□ -0.56
HDAC1-208ENST00000482310 ARPC4-TTLL3A0A0A6YYG9 625 aa11.53□□□□□ -0.56
HDAC1-208ENST00000482310 C12orf71A8MTZ7 269 aa11.53□□□□□ -0.56
HDAC1-208ENST00000482310 H0YAE9 185 aa11.53□□□□□ -0.56
HDAC1-208ENST00000482310 ZNF593O00488 134 aaPredicted RBP11.53□□□□□ -0.56
HDAC1-208ENST00000482310 CST2P09228 141 aa11.53□□□□□ -0.56
HDAC1-208ENST00000482310 PPP3CBP16298 524 aa11.53□□□□□ -0.56
HDAC1-208ENST00000482310 ENTPD1P49961 510 aa11.53□□□□□ -0.56
HDAC1-208ENST00000482310 RAB1AP62820 205 aa11.53□□□□□ -0.56
HDAC1-208ENST00000482310 EFNB1P98172 346 aa11.53□□□□□ -0.56
HDAC1-208ENST00000482310 SPOCK1Q08629 439 aa11.53□□□□□ -0.56
HDAC1-208ENST00000482310 MAD2L1BPQ15013 274 aaPredicted RBP11.53□□□□□ -0.56
HDAC1-208ENST00000482310 SMN1Q16637 294 aaKnown RBP11.53□□□□□ -0.56
HDAC1-208ENST00000482310 PABPC1L2AQ5JQF8 200 aa11.53□□□□□ -0.56
HDAC1-208ENST00000482310 FAM27BQ5VT28 67 aa11.53□□□□□ -0.56
HDAC1-208ENST00000482310 AADACL4Q5VUY2 407 aa11.53□□□□□ -0.56
HDAC1-208ENST00000482310 MEPCEQ7L2J0 689 aaKnown RBP11.53□□□□□ -0.56
HDAC1-208ENST00000482310 SETD9Q8NE22 299 aa11.53□□□□□ -0.56
HDAC1-208ENST00000482310 OR51G2Q8NGK0 314 aa11.53□□□□□ -0.56
HDAC1-208ENST00000482310 OR2AJ1Q8NGZ0 328 aa11.53□□□□□ -0.56
HDAC1-208ENST00000482310 APH1BQ8WW43 257 aa11.53□□□□□ -0.56
HDAC1-208ENST00000482310 TFAP2CQ92754 450 aa11.53□□□□□ -0.56
HDAC1-208ENST00000482310 PIK3IP1Q96FE7 263 aa11.53□□□□□ -0.56
HDAC1-208ENST00000482310 CNBD2Q96M20 576 aa11.53□□□□□ -0.56
HDAC1-208ENST00000482310 TBX5Q99593 518 aa11.53□□□□□ -0.56
HDAC1-208ENST00000482310 TEAD3Q99594 435 aa11.53□□□□□ -0.56
HDAC1-208ENST00000482310 AMBNQ9NP70 447 aa11.53□□□□□ -0.56
HDAC1-208ENST00000482310 CLN6Q9NWW5 311 aa11.53□□□□□ -0.56
HDAC1-208ENST00000482310 KCNG2Q9UJ96 466 aa11.53□□□□□ -0.56
HDAC1-208ENST00000482310 MOKQ9UQ07 419 aa11.53□□□□□ -0.56
HDAC1-208ENST00000482310 LHFPL6Q9Y693 200 aa11.53□□□□□ -0.56
HDAC1-208ENST00000482310 ITPR2Q14571 2701 aa11.52□□□□□ -0.56
HDAC1-208ENST00000482310 SLC22A31A6NKX4 558 aa11.52□□□□□ -0.57
HDAC1-208ENST00000482310 H0YJX3 145 aa11.52□□□□□ -0.57
HDAC1-208ENST00000482310 RER1O15258 196 aa11.52□□□□□ -0.57
HDAC1-208ENST00000482310 DOK2O60496 412 aa11.52□□□□□ -0.57
HDAC1-208ENST00000482310 CCL2P13500 99 aa11.52□□□□□ -0.57
HDAC1-208ENST00000482310 IGFBP2P18065 325 aa11.52□□□□□ -0.57
HDAC1-208ENST00000482310 GABRB1P18505 474 aa11.52□□□□□ -0.57
HDAC1-208ENST00000482310 CCNOP22674 350 aa11.52□□□□□ -0.57
HDAC1-208ENST00000482310 HSPA13P48723 471 aa11.52□□□□□ -0.57
HDAC1-208ENST00000482310 SNRPGP62308 76 aaKnown RBP11.52□□□□□ -0.57
HDAC1-208ENST00000482310 AQP6Q13520 282 aa11.52□□□□□ -0.57
HDAC1-208ENST00000482310 EIF2B1Q14232 305 aaKnown RBP11.52□□□□□ -0.57
HDAC1-208ENST00000482310 SLC35D3Q5M8T2 416 aa11.52□□□□□ -0.57
HDAC1-208ENST00000482310 ZNF774Q6NX45 483 aa11.52□□□□□ -0.57
HDAC1-208ENST00000482310 CFAP77Q6ZQR2 320 aa11.52□□□□□ -0.57
HDAC1-208ENST00000482310 DPY19L4Q7Z388 723 aa11.52□□□□□ -0.57
HDAC1-208ENST00000482310 P2RY8Q86VZ1 359 aa11.52□□□□□ -0.57
HDAC1-208ENST00000482310 TRUB1Q8WWH5 349 aaKnown RBP11.52□□□□□ -0.57
HDAC1-208ENST00000482310 RNFT2Q96EX2 444 aa11.52□□□□□ -0.57
HDAC1-208ENST00000482310 PLPPR2Q96GM1 343 aa11.52□□□□□ -0.57
HDAC1-208ENST00000482310 CNN2Q99439 309 aaKnown RBP11.52□□□□□ -0.57
HDAC1-208ENST00000482310 ZNF184Q99676 751 aaPredicted RBP11.52□□□□□ -0.57
HDAC1-208ENST00000482310 OR2H1Q9GZK4 316 aa11.52□□□□□ -0.57
HDAC1-208ENST00000482310 OR10A4Q9H209 315 aa11.52□□□□□ -0.57
HDAC1-208ENST00000482310 OR51B6Q9H340 312 aa11.52□□□□□ -0.57
HDAC1-208ENST00000482310 B3GNT2Q9NY97 397 aa11.52□□□□□ -0.57
HDAC1-208ENST00000482310 PLEK2Q9NYT0 353 aa11.52□□□□□ -0.57
HDAC1-208ENST00000482310 GDF2Q9UK05 429 aaPredicted RBP11.52□□□□□ -0.57
HDAC1-208ENST00000482310 IGHV1-18A0A0C4DH31 117 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.51□□□□□ -0.57
HDAC1-208ENST00000482310 SIAH2O43255 324 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 MPZL2O60487 215 aa11.51□□□□□ -0.57
HDAC1-208ENST00000482310 MMP7P09237 267 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms