RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 OAZ3Q9UMX2 235 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 B9D1Q9UPM9 204 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 IER3IP1Q9Y5U9 82 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 TMEM14AQ9Y6G1 99 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 HSPE1-MOB4S4R3N1 261 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 U3KQV3 271 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 V9GYQ6 96 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 MED13LQ71F56 2210 aa4.42□□□□□ -1.7
HDAC6-223ENST00000480525 YLPM1P49750 1951 aaKnown RBP4.42□□□□□ -1.7
HDAC6-223ENST00000480525 F8P00451 2351 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 FLNAP21333 2647 aaKnown RBP4.41□□□□□ -1.7
HDAC6-223ENST00000480525 IGHV2OR16-5A0A0B4J2B6 119 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 IQCMA0A1B0GVH7 501 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 OR6C68A6NDL8 312 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 ACOD1A6NK06 481 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 SLC22A31A6NKX4 558 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 SNTNA6NMZ2 147 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 B9A039 149 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 H0YAE9 185 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 H3BN98 237 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 ABCD4O14678 606 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 PHYHO14832 338 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 SGCEO43556 437 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 SYNGR3O43761 229 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 SLC16A7O60669 478 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 ZNF254O75437 659 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 GLCEO94923 617 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 ATE1O95260 518 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 SLC2A10O95528 541 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 IGHV3-9P01782 118 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 CSF3P09919 207 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 CECR9P0C854 216 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 ZNF250P15622 560 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 SPI1P17947 270 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 CD53P19397 219 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 CPT2P23786 658 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 FMO3P31513 532 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 APOBEC3AP31941 199 aaPredicted RBP4.41□□□□□ -1.7
HDAC6-223ENST00000480525 TTKP33981 857 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 GGT2P36268 569 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 CAPZA2P47755 286 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 FOXG1P55316 489 aaPredicted RBP4.41□□□□□ -1.7
HDAC6-223ENST00000480525 CDC42P60953 191 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 SNRPGP62308 76 aaKnown RBP4.41□□□□□ -1.7
HDAC6-223ENST00000480525 NPRL3Q12980 569 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 KEAP1Q14145 624 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 ENDOGQ14249 297 aaKnown RBP4.41□□□□□ -1.7
HDAC6-223ENST00000480525 MELKQ14680 651 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 PTGES3Q15185 160 aaKnown RBP4.41□□□□□ -1.7
HDAC6-223ENST00000480525 TESK1Q15569 626 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 SNCBQ16143 134 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 SWI5Q1ZZU3 235 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 TBC1D28Q2M2D7 210 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 HIKESHIQ53FT3 197 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 ZMAT1Q5H9K5 638 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 LCN1P1Q5VSP4 162 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 AGAP6Q5VW22 663 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 SHEQ5VZ18 495 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 MBNL2Q5VZF2 373 aaKnown RBP4.41□□□□□ -1.7
HDAC6-223ENST00000480525 C11orf71Q6IPW1 123 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 LEG1Q6P5S2 330 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 DNM1P46Q6ZS02 220 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 SHFQ7M4L6 423 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 MDP1Q86V88 176 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 ZNF584Q8IVC4 421 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 GID4Q8IVV7 300 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 WDFY1Q8IWB7 410 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 SKA3Q8IX90 412 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 SLC37A3Q8NCC5 494 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 LILRB1Q8NHL6 650 aaPredicted RBP4.41□□□□□ -1.7
HDAC6-223ENST00000480525 LRTOMTQ8WZ04 291 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 RFKQ969G6 155 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 ZNF775Q96BV0 537 aaPredicted RBP4.41□□□□□ -1.7
HDAC6-223ENST00000480525 POM121L2Q96KW2 1035 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 DIRC2Q96SL1 478 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 NMNAT3Q96T66 252 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 KCNS3Q9BQ31 491 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 TRAF4Q9BUZ4 470 aaPredicted RBP4.41□□□□□ -1.7
HDAC6-223ENST00000480525 ZNF416Q9BWM5 594 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 JAM3Q9BX67 310 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 OR2H1Q9GZK4 316 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 YIPF3Q9GZM5 350 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 RASSF4Q9H2L5 321 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 PLK3Q9H4B4 646 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 CXorf56Q9H5V9 222 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 EGLN3Q9H6Z9 239 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 SP140LQ9H930 580 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 ELOVL3Q9HB03 270 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 NOX3Q9HBY0 568 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 CYSLTR2Q9NS75 346 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 CA10Q9NS85 328 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 CBLN4Q9NTU7 201 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 KIF17Q9P2E2 1029 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 GPR160Q9UJ42 338 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 ORC6Q9Y5N6 252 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 COMMD3-BMI1R4GMX3 469 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 DOCK11Q5JSL3 2073 aa4.41□□□□□ -1.7
HDAC6-223ENST00000480525 IGKV1D-43A0A0B4J1Z2 117 aa4.4□□□□□ -1.71
HDAC6-223ENST00000480525 A0A1W2PPR1 153 aa4.4□□□□□ -1.71
HDAC6-223ENST00000480525 ZNF503-AS2A6NEH8 195 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms