RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 OR8G3PP0DMU2 310 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 NPR2P20594 1047 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 PCMT1P22061 227 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 DCKP27707 260 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 MPGP29372 298 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 RPS27P42677 84 aaKnown RBP5.21□□□□□ -1.58
USP39-213ENST00000467885 UQCRFS1P47985 274 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 ETV1P50549 477 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 CASP6P55212 293 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 GLO1Q04760 184 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 FAM27E3Q08E93 113 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 DOC2BQ14184 412 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 P2RY6Q15077 328 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 CDSNQ15517 529 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 NRN1LQ496H8 165 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 KCTD21Q4G0X4 260 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 CCDC92Q53HC0 331 aaPredicted RBP5.21□□□□□ -1.58
USP39-213ENST00000467885 SFRP5Q5T4F7 317 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 C9orf135Q5VTT2 229 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 ANKRD16Q6P6B7 361 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 STAC2Q6ZMT1 411 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 BEND4Q6ZU67 534 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 SHFQ7M4L6 423 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 SSX6Q7RTT6 188 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 PRSS48Q7RTY5 328 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 DPY19L4Q7Z388 723 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 SYT9Q86SS6 491 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 CDC20BQ86Y33 519 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 EGFL6Q8IUX8 553 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 UBE2J2Q8N2K1 259 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 SLC22A24Q8N4F4 322 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 ACBD7Q8N6N7 88 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 NANOGP1Q8N7R0 232 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 RELL2Q8NC24 303 aaPredicted RBP5.21□□□□□ -1.58
USP39-213ENST00000467885 PROKR2Q8NFJ6 384 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 OR51G2Q8NGK0 314 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 OR10S1Q8NGN2 331 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 OTOSQ8NHW6 89 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 MYDGFQ969H8 173 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 MAP6Q96JE9 813 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 AMELYQ99218 206 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 FOXB1Q99853 325 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 COPS4Q9BT78 406 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 ZNF416Q9BWM5 594 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 SFXN3Q9BWM7 321 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 HDHD5Q9BXW7 423 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 ULBP2Q9BZM5 246 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 NELFAQ9H3P2 528 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 PIGMQ9H3S5 423 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 EMC7Q9NPA0 242 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 B3GAT2Q9NPZ5 323 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 ERVK13-1Q9NX77 482 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 UPB1Q9UBR1 384 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 SH3BGRL2Q9UJC5 107 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 PROCRQ9UNN8 238 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 DIMT1Q9UNQ2 313 aaKnown RBP5.21□□□□□ -1.58
USP39-213ENST00000467885 COPS3Q9UNS2 423 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 KLHDC2Q9Y2U9 406 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 LHFPL6Q9Y693 200 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 KMT2BQ9UMN6 2715 aaPredicted RBP5.21□□□□□ -1.58
USP39-213ENST00000467885 KIAA1549Q9HCM3 1950 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 GTF3C1Q12789 2109 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 POLEQ07864 2286 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 BSNQ9UPA5 3926 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 A0A096LPE4 126 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 A0A1W2PPZ6 126 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 ZNF503-AS2A6NEH8 195 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 C12orf71A8MTZ7 269 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 RER1O15258 196 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 KRT33AO76009 404 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 TNFAIP8O95379 198 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 HLA-DQA2P01906 255 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 MT-ND2P03891 347 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 MRPL3P09001 348 aaKnown RBP5.2□□□□□ -1.58
USP39-213ENST00000467885 CST2P09228 141 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 ZNF823P16415 610 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 JUNBP17275 347 aaPredicted RBP5.2□□□□□ -1.58
USP39-213ENST00000467885 MSR1P21757 451 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 ATP6V1E1P36543 226 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 GUCA1AP43080 201 aaPredicted RBP5.2□□□□□ -1.58
USP39-213ENST00000467885 MAP2K4P45985 399 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 ENTPD1P49961 510 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 ZNF84P51523 738 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 OR12D2P58182 307 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 RPS7P62081 194 aaKnown RBP5.2□□□□□ -1.58
USP39-213ENST00000467885 PSG4Q00888 419 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 ROM1Q03395 351 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 SRSF1Q07955 248 aaKnown RBP eCLIP5.2□□□□□ -1.58
USP39-213ENST00000467885 GALEQ14376 348 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 TSC22D1Q15714 1073 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 C4orf17Q53FE4 359 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 XAF1Q6GPH4 301 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 SLC18B1Q6NT16 456 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 DNM1P34Q6PK57 102 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 CORO6Q6QEF8 472 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 ZNF813Q6ZN06 617 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 AHSA2Q719I0 299 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 RHOUQ7L0Q8 258 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 KCTD20Q7Z5Y7 419 aa5.2□□□□□ -1.58
USP39-213ENST00000467885 NAA40Q86UY6 237 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms