RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 MSMPQ1L6U9 139 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 DNM1P46Q6ZS02 220 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 SYT9Q86SS6 491 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 GLB1L2Q8IW92 636 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 CPEB3Q8NE35 698 aaKnown RBP11.12□□□□□ -0.63
COL5A1-206ENST00000465877 OR4K13Q8NH42 304 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 MRPL24Q96A35 216 aaKnown RBP11.12□□□□□ -0.63
COL5A1-206ENST00000465877 SLCO4A1Q96BD0 722 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 C18orf12Q96KH6 178 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 TSSK2Q96PF2 358 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 SORCS2Q96PQ0 1159 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 NIPSNAP1Q9BPW8 284 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 RACGAP1Q9H0H5 632 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 WNT5BQ9H1J7 359 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 OR51B6Q9H340 312 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 MMADHCQ9H3L0 296 aaPredicted RBP11.12□□□□□ -0.63
COL5A1-206ENST00000465877 RPRD1BQ9NQG5 326 aaKnown RBP11.12□□□□□ -0.63
COL5A1-206ENST00000465877 ARMC1Q9NVT9 282 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 COA3Q9Y2R0 106 aaPredicted RBP11.12□□□□□ -0.63
COL5A1-206ENST00000465877 CMAHPQ9Y471 501 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 FKBP7Q9Y680 259 aa11.12□□□□□ -0.63
COL5A1-206ENST00000465877 TANC2Q9HCD6 1990 aa11.11□□□□□ -0.63
COL5A1-206ENST00000465877 IDH3BO43837 385 aa11.11□□□□□ -0.63
COL5A1-206ENST00000465877 SSX4O60224 188 aa11.11□□□□□ -0.63
COL5A1-206ENST00000465877 DOK2O60496 412 aa11.11□□□□□ -0.63
COL5A1-206ENST00000465877 TP53P04637 393 aaPredicted RBP11.11□□□□□ -0.63
COL5A1-206ENST00000465877 STOMP27105 288 aa11.11□□□□□ -0.63
COL5A1-206ENST00000465877 CRABP1P29762 137 aa11.11□□□□□ -0.63
COL5A1-206ENST00000465877 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.11□□□□□ -0.63
COL5A1-206ENST00000465877 DBPQ10586 325 aaPredicted RBP11.11□□□□□ -0.63
COL5A1-206ENST00000465877 AQP6Q13520 282 aa11.11□□□□□ -0.63
COL5A1-206ENST00000465877 RAB35Q15286 201 aa11.11□□□□□ -0.63
COL5A1-206ENST00000465877 SLC35F1Q5T1Q4 408 aa11.11□□□□□ -0.63
COL5A1-206ENST00000465877 C1orf146Q5VVC0 180 aa11.11□□□□□ -0.63
COL5A1-206ENST00000465877 OTPQ5XKR4 325 aa11.11□□□□□ -0.63
COL5A1-206ENST00000465877 ZNF774Q6NX45 483 aa11.11□□□□□ -0.63
COL5A1-206ENST00000465877 TMEM179BQ7Z7N9 219 aa11.11□□□□□ -0.63
COL5A1-206ENST00000465877 CIARTQ8N365 385 aaPredicted RBP11.11□□□□□ -0.63
COL5A1-206ENST00000465877 PAPD5Q8NDF8 572 aaKnown RBP11.11□□□□□ -0.63
COL5A1-206ENST00000465877 OR1J2Q8NGS2 313 aa11.11□□□□□ -0.63
COL5A1-206ENST00000465877 GIPC3Q8TF64 312 aa11.11□□□□□ -0.63
COL5A1-206ENST00000465877 WACQ9BTA9 647 aa11.11□□□□□ -0.63
COL5A1-206ENST00000465877 MRPL37Q9BZE1 423 aaKnown RBP11.11□□□□□ -0.63
COL5A1-206ENST00000465877 DYNLRB1Q9NP97 96 aa11.11□□□□□ -0.63
COL5A1-206ENST00000465877 ASH2LQ9UBL3 628 aa11.11□□□□□ -0.63
COL5A1-206ENST00000465877 FBXO9Q9UK97 447 aaPredicted RBP11.11□□□□□ -0.63
COL5A1-206ENST00000465877 POLR1DQ9Y2S0 133 aa11.11□□□□□ -0.63
COL5A1-206ENST00000465877 LOC100509620A0A075B734 347 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 TMEM129A0AVI4 362 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 C5orf49A4QMS7 147 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 OR6C68A6NDL8 312 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 VSTM5A8MXK1 200 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 M0R233 179 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 MPZL1O95297 269 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 GPANK1O95872 356 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 IGFBP1P08833 259 aaPredicted RBP11.1□□□□□ -0.63
COL5A1-206ENST00000465877 INHBBP09529 407 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 FOSL1P15407 271 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 CCNOP22674 350 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 PCSK6P29122 969 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 WNT5AP41221 380 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 HTR5AP47898 357 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 GDI2P50395 445 aaKnown RBP11.1□□□□□ -0.63
COL5A1-206ENST00000465877 ERVS71-1P61550 626 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 LSM6P62312 80 aaKnown RBP11.1□□□□□ -0.63
COL5A1-206ENST00000465877 SLC36A3Q495N2 470 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 RGS7BPQ6MZT1 257 aaPredicted RBP11.1□□□□□ -0.63
COL5A1-206ENST00000465877 RFPL4BQ6ZWI9 263 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.1□□□□□ -0.63
COL5A1-206ENST00000465877 ZBTB46Q86UZ6 589 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 ALDH16A1Q8IZ83 802 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 HS3ST5Q8IZT8 346 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 ZNF525Q8N782 197 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 OR2T33Q8NG76 320 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 OR52E2Q8NGJ4 325 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 OR4Q3Q8NH05 313 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 TEX47Q8TBZ9 253 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 C11orf40Q8WZ69 217 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 POM121L2Q96KW2 1035 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 FEVQ99581 238 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 VRK1Q99986 396 aaPredicted RBP11.1□□□□□ -0.63
COL5A1-206ENST00000465877 SYT3Q9BQG1 590 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 BDH2Q9BUT1 245 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 TSSK6Q9BXA6 273 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 BCL2L14Q9BZR8 327 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 PDP1Q9P0J1 537 aaPredicted RBP11.1□□□□□ -0.63
COL5A1-206ENST00000465877 DNAJB9Q9UBS3 223 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 NDRG4Q9ULP0 352 aaKnown RBP11.1□□□□□ -0.63
COL5A1-206ENST00000465877 FZR1Q9UM11 496 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 TIMM10BQ9Y5J6 103 aa11.1□□□□□ -0.63
COL5A1-206ENST00000465877 ANK3Q12955 4377 aaKnown RBP11.09□□□□□ -0.63
COL5A1-206ENST00000465877 RTTNQ86VV8 2226 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 TLN2Q9Y4G6 2542 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 A0A1W2PPW3 197 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 SMAD7O15105 426 aaKnown RBP11.09□□□□□ -0.63
COL5A1-206ENST00000465877 SGCEO43556 437 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 DEAF1O75398 565 aaPredicted RBP11.09□□□□□ -0.63
COL5A1-206ENST00000465877 TIPRLO75663 272 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 LY6HO94772 140 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 LCKP06239 509 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms