RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 PAQR7Q86WK9 346 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 SLC30A8Q8IWU4 369 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 HS3ST5Q8IZT8 346 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 GPC2Q8N158 579 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 TOMM5Q8N4H5 51 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 GPR26Q8NDV2 337 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 PROKR2Q8NFJ6 384 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 PXT1Q8NFP0 134 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 BEST4Q8NFU0 473 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 OR10A6Q8NH74 314 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 NANPQ8TBE9 248 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 STAG3L4Q8TBR4 150 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 C15orf40Q8WUR7 153 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 ASZ1Q8WWH4 475 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 NR4A3Q92570 626 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 GGHQ92820 318 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 NTAN1Q96AB6 310 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 EXOSC8Q96B26 276 aaKnown RBP3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 PHYHIPLQ96FC7 376 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 PRAC1Q96KF2 57 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 LGMNQ99538 433 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 OMDQ99983 421 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 CCM2Q9BSQ5 444 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 PAPOLGQ9BWT3 736 aaKnown RBP3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 POLR2J2Q9GZM3 115 aaKnown RBP3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 ABCG5Q9H222 651 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 P2RY12Q9H244 342 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 SLC38A1Q9H2H9 487 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 LRRN3Q9H3W5 708 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 TDRD3Q9H7E2 651 aaKnown RBP3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 HEXA-AS1Q9H8Q6 139 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 RPF1Q9H9Y2 349 aaKnown RBP3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 CACYBPQ9HB71 228 aaKnown RBP3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 ISYNA1Q9NPH2 558 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 NIT2Q9NQR4 276 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 GPR173Q9NS66 373 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 MAN2C1Q9NTJ4 1040 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 GPR83Q9NYM4 423 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 NUDT4Q9NZJ9 180 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 TSPAN16Q9UKR8 245 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 SCML1Q9UN30 329 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 HES2Q9Y543 173 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 NPTNQ9Y639 398 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 CDH10Q9Y6N8 788 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 PLXNA3P51805 1871 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 KANTRA0A1W2PQU2 76 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 TMEM129A0AVI4 362 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 GSAPA4D1B5 854 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 MTMR11A4FU01 709 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 HMSDA8MTL9 139 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 HHLA1C9JL84 531 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 DNASE2O00115 360 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 TNFRSF11BO00300 401 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 GPR171O14626 319 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 PLA2G10O15496 165 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 NIPSNAP2O75323 286 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 ENTPD6O75354 484 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 CSO75390 466 aaKnown RBP3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 ATG12O94817 140 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 GLCEO94923 617 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 OR4F21O95013 312 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 EPOP01588 193 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 HLA-DPB1P04440 258 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 CD2P06729 351 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 STSP08842 583 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 HIST1H2AGP0C0S8 130 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 SBK2P0C263 348 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 FOLR2P14207 255 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 CD1DP15813 335 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 CEBPBP17676 345 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 HLA-DPA1P20036 260 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 GALP22466 123 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 ELAVL4P26378 380 aaKnown RBP3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 S100A2P29034 98 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 CALCRP30988 508 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 CTNNB1P35222 781 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 BDKRB1P46663 353 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 STK19P49842 368 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 DIO3P55073 304 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 WNT4P56705 351 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 TAS2R60P59551 318 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 ERVK-25P63136 954 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 SPIBQ01892 262 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 SRSF9Q13242 221 aaKnown RBP eCLIP3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 ITPK1Q13572 414 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 GRB7Q14451 532 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 PEA15Q15121 130 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 TRAM1Q15629 374 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 NDUFA9Q16795 377 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 UNC50Q53HI1 259 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 ZNF542PQ5EBM4 170 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 HIST2H2AA3Q6FI13 130 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 OR4F3Q6IEY1 312 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 ADNP2Q6IQ32 1131 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 LRRN1Q6UXK5 716 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 DLEU7Q6UYE1 221 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 UNC93AQ86WB7 457 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 KLHDC8BQ8IXV7 354 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 KLHDC8AQ8IYD2 350 aa3.82□□□□□ -1.8
HMGB1P16-201ENST00000447155 SPICQ8N5J4 248 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms