RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 CALCBP10092 127 aa16.79■□□□□ 0.28
SEMA3D-202ENST00000444867 SNRPBP14678 240 aaKnown RBP16.79■□□□□ 0.28
SEMA3D-202ENST00000444867 CASRP41180 1078 aa16.79■□□□□ 0.28
SEMA3D-202ENST00000444867 SOX2P48431 317 aa16.79■□□□□ 0.28
SEMA3D-202ENST00000444867 AGFG1P52594 562 aaKnown RBP16.79■□□□□ 0.28
SEMA3D-202ENST00000444867 PITPNAQ00169 270 aa16.79■□□□□ 0.28
SEMA3D-202ENST00000444867 OC90Q02509 493 aaPredicted RBP16.79■□□□□ 0.28
SEMA3D-202ENST00000444867 ASB18Q6ZVZ8 466 aa16.79■□□□□ 0.28
SEMA3D-202ENST00000444867 LRRTM1Q86UE6 522 aa16.79■□□□□ 0.28
SEMA3D-202ENST00000444867 OR5H6Q8NGV6 325 aa16.79■□□□□ 0.28
SEMA3D-202ENST00000444867 TSEN15Q8WW01 171 aaKnown RBP16.79■□□□□ 0.28
SEMA3D-202ENST00000444867 C1orf198Q9H425 327 aa16.79■□□□□ 0.28
SEMA3D-202ENST00000444867 A0A0G2JMM0 328 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 A0A0G2JMP0 313 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 A0A0X1KG70 313 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 A0A1W2PPB8 328 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 A0A1W2PPL8 197 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 A0A1W2PRS3 328 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 LRRC3CA6NJW4 275 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 KIR3DP1A8MWS1 328 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 CDK2AP1O14519 115 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 RAMP1O60894 148 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 H2BFMP0C1H6 154 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 CD82P27701 267 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 MAGEB1P43366 347 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 INPP1P49441 399 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 SCAND1P57086 179 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 TOMM20Q15388 145 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 ABHD17BQ5VST6 288 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 MZT2BQ6NZ67 158 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 SPATC1Q76KD6 591 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 RHOUQ7L0Q8 258 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 LINC00346Q8IVM7 164 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 ZNF433Q8N7K0 673 aaPredicted RBP16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 OR4M2Q8NGB6 313 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 OR14L1PQ8NHC6 308 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 TMEM106AQ96A25 262 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 ORAI1Q96D31 301 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 SMAD5Q99717 465 aaKnown RBP16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 WACQ9BTA9 647 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 OR2B2Q9GZK3 357 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 C11orf54Q9H0W9 315 aaPredicted RBP16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 BOKQ9UMX3 212 aaPredicted RBP16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 PCDHGA9Q9Y5G4 932 aaKnown RBP16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 A0A0J9YW62 118 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 TTLL8A6PVC2 850 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 PLA2G10O15496 165 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 SLC43A1O75387 559 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 UBL3O95164 117 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 WNT11O96014 354 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 ISG15P05161 165 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 PRKAR1AP10644 381 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 CFPP27918 469 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 ZNF133P52736 654 aaPredicted RBP16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 CLDN17P56750 224 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 MFGE8Q08431 387 aaPredicted RBP16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 AIMP2Q13155 320 aaKnown RBP16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 MADCAM1Q13477 382 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 DCAF10Q5QP82 559 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 ZNF704Q6ZNC4 412 aaPredicted RBP16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 CREB3L2Q70SY1 520 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 OR10AC1Q8NH08 325 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 LGALS14Q8TCE9 139 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 CHAC2Q8WUX2 184 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 SF3B5Q9BWJ5 86 aaKnown RBP16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 ZFP64Q9NPA5 681 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 PARD6AQ9NPB6 346 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 LRFN1Q9P244 771 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 GTF2A1LQ9UNN4 478 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 SLC22A13Q9Y226 551 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 ETV7Q9Y603 341 aa16.78■□□□□ 0.28
SEMA3D-202ENST00000444867 NCKAP5O14513 1909 aa16.77■□□□□ 0.28
SEMA3D-202ENST00000444867 PCNX2A6NKB5 2137 aa16.77■□□□□ 0.27
SEMA3D-202ENST00000444867 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.77■□□□□ 0.27
SEMA3D-202ENST00000444867 NPIPA2E9PIF3 369 aa16.77■□□□□ 0.27
SEMA3D-202ENST00000444867 NPIPA3F8WFD2 350 aa16.77■□□□□ 0.27
SEMA3D-202ENST00000444867 SSX4O60224 188 aa16.77■□□□□ 0.27
SEMA3D-202ENST00000444867 CD2P06729 351 aa16.77■□□□□ 0.27
SEMA3D-202ENST00000444867 ACHEP22303 614 aa16.77■□□□□ 0.27
SEMA3D-202ENST00000444867 RANBP1P43487 201 aa16.77■□□□□ 0.27
SEMA3D-202ENST00000444867 MMP16P51512 607 aa16.77■□□□□ 0.27
SEMA3D-202ENST00000444867 RAC3P60763 192 aa16.77■□□□□ 0.27
SEMA3D-202ENST00000444867 HES5Q5TA89 166 aa16.77■□□□□ 0.27
SEMA3D-202ENST00000444867 RDH10Q8IZV5 341 aa16.77■□□□□ 0.27
SEMA3D-202ENST00000444867 TMEM54Q969K7 222 aa16.77■□□□□ 0.27
SEMA3D-202ENST00000444867 PNPLA2Q96AD5 504 aa16.77■□□□□ 0.27
SEMA3D-202ENST00000444867 INTS12Q96CB8 462 aaKnown RBP16.77■□□□□ 0.27
SEMA3D-202ENST00000444867 SLAMF6Q96DU3 332 aa16.77■□□□□ 0.27
SEMA3D-202ENST00000444867 ITPKCQ96DU7 683 aa16.77■□□□□ 0.27
SEMA3D-202ENST00000444867 ZC3HAV1LQ96H79 300 aaKnown RBP16.77■□□□□ 0.27
SEMA3D-202ENST00000444867 FER1L6-AS2Q96M78 137 aa16.77■□□□□ 0.27
SEMA3D-202ENST00000444867 G6PC2Q9NQR9 355 aa16.77■□□□□ 0.27
SEMA3D-202ENST00000444867 GLTPQ9NZD2 209 aa16.77■□□□□ 0.27
SEMA3D-202ENST00000444867 OR52A1Q9UKL2 312 aa16.77■□□□□ 0.27
SEMA3D-202ENST00000444867 DHDHQ9UQ10 334 aa16.77■□□□□ 0.27
SEMA3D-202ENST00000444867 CAMK2AQ9UQM7 478 aa16.77■□□□□ 0.27
SEMA3D-202ENST00000444867 MRPS18BQ9Y676 258 aaKnown RBP16.77■□□□□ 0.27
SEMA3D-202ENST00000444867 ZFHX2Q9C0A1 2572 aaPredicted RBP16.76■□□□□ 0.27
SEMA3D-202ENST00000444867 ANXA2P2A6NMY6 339 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms