RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 DEDD2Q8WXF8 326 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 CACNG8Q8WXS5 425 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 SGK3Q96BR1 496 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 NHEJ1Q9H9Q4 299 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 UGT1A7Q9HAW7 530 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 UGT1A8Q9HAW9 530 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 SLC40A1Q9NP59 571 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 MRPL22Q9NWU5 206 aaKnown RBP2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 ZNF629Q9UEG4 869 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 KCNIP3Q9Y2W7 256 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 WIF1Q9Y5W5 379 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 MROH7-TTC4A0A0A0MT08 1334 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 IGSF9BQ9UPX0 1349 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 IGKV1D-13A0A0B4J2D9 117 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 TRBV11-1A0A0K0K1C0 115 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 LOC100506127A0A0U1RQW1 187 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 LOC100653049A0A140TA62 436 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 A0A1W2PPV4 95 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 ZNF879B4DU55 563 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 BCKDKO14874 412 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 CLOCKO15516 846 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 CHST1O43916 411 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 KRT34O76011 436 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 SERPIND1P05546 499 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 GKN3PP0CG01 181 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 STAG3L2P0CL84 134 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 IGKV1-13P0DP09 117 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 MCF2P10911 925 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 PTNP21246 168 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 PRKACBP22694 351 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 STOMP27105 288 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 DCKP27707 260 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 OTX1P32242 354 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 RPL13AP40429 203 aaKnown RBP2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 GPR4P46093 362 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 ATP5J2P56134 94 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 ACTA2P62736 377 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 ACTC1P68032 377 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 SMARCB1Q12824 385 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 SELENBP1Q13228 472 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 OR5I1Q13606 314 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 Q3ZCU0 254 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 C5orf47Q569G3 176 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 BEX5Q5H9J7 111 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 SLC25A25Q6KCM7 469 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 VTCN1Q7Z7D3 282 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 TCAIMQ8N3R3 496 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 ZNF615Q8N8J6 731 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 ASCC1Q8N9N2 400 aaKnown RBP2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 VN1R2Q8NFZ6 395 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 OR4F6Q8NGB9 312 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 OR52E5Q8NH55 327 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 CD300LFQ8TDQ1 290 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 PIBF1Q8WXW3 757 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 FRZBQ92765 325 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 RAB1CQ92928 201 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 AURKBQ96GD4 344 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 PLEKHA8Q96JA3 519 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 RIOK1Q9BRS2 568 aaKnown RBP2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 RACGAP1Q9H0H5 632 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 PPA2Q9H2U2 334 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 CTPS2Q9NRF8 586 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 C20orf96Q9NUD7 363 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 ZNHIT6Q9NWK9 470 aaKnown RBP2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 IKZF2Q9UKS7 526 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 V9GYY5 206 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 NFASCO94856 1347 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 MAP3K19Q56UN5 1328 aa2.35□□□□□ -2.03
HMGB1P49-201ENST00000418882 A0A1B0GUH1 482 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 OR6C74A6NCV1 312 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 K7ERQ8 282 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 ZBTB5O15062 677 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 KDELR3O43731 214 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 CTDNEP1O95476 244 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 MBP02144 154 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 ANXA5P08758 320 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 CSF3P09919 207 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 HSMCR30P0CW71 290 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 TNNI1P19237 187 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 MSR1P21757 451 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 OPRD1P41143 372 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 GYG1P46976 350 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 HMGCS1Q01581 520 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 SIGLEC14Q08ET2 396 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 WDR43Q15061 677 aaKnown RBP eCLIP2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 KLHL38Q2WGJ6 581 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 MLIPQ5VWP3 458 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 LRRC75AQ8NAA5 344 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 PROKR2Q8NFJ6 384 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 B3GNT7Q8NFL0 401 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 OR9G4Q8NGQ1 327 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 OR1N2Q8NGR9 330 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 PLPPR1Q8TBJ4 325 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 MITD1Q8WV92 249 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 MAIP1Q8WWC4 291 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 ASZ1Q8WWH4 475 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 CERS2Q96G23 380 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 BMFQ96LC9 184 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 WFIKKN1Q96NZ8 548 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms