RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 SIGLEC12Q96PQ1 595 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 UCN2Q96RP3 112 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 FAM86C1Q9NVL1 165 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 R4GMQ9 66 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 OTOGLQ3ZCN5 2332 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 ARPC4-TTLL3A0A0A6YYG9 625 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 A0A1W2PQ09 198 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 EIF1AYO14602 144 aaKnown RBP16.86■□□□□ 0.29
USP39-202ENST00000409025 PAHP00439 452 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 CSF3P09919 207 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 H2BFMP0C1H6 154 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 NPR2P20594 1047 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 MFGE8Q08431 387 aaPredicted RBP16.86■□□□□ 0.29
USP39-202ENST00000409025 FOXO1Q12778 655 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 RIN1Q13671 783 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 OR1C1Q15619 314 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 CORO6Q6QEF8 472 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 DTX1Q86Y01 620 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.86■□□□□ 0.29
USP39-202ENST00000409025 ZNF433Q8N7K0 673 aaPredicted RBP16.86■□□□□ 0.29
USP39-202ENST00000409025 OR2M7Q8NG81 312 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 OR9K2Q8NGE7 335 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 RNF133Q8WVZ7 376 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 ADAMTS14Q8WXS8 1223 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 SRXN1Q9BYN0 137 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 BRD7Q9NPI1 651 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 CYB5R1Q9UHQ9 305 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 TBC1D24Q9ULP9 559 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 SLC22A13Q9Y226 551 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 MED12Q93074 2177 aa16.85■□□□□ 0.29
USP39-202ENST00000409025 NCKAP5O14513 1909 aa16.85■□□□□ 0.29
USP39-202ENST00000409025 AHCTF1Q8WYP5 2266 aa16.85■□□□□ 0.29
USP39-202ENST00000409025 TRBV5-7A0A0A0MS05 114 aa16.85■□□□□ 0.29
USP39-202ENST00000409025 CDRT15L2A8MXV6 281 aa16.85■□□□□ 0.29
USP39-202ENST00000409025 TMEM127O75204 238 aa16.85■□□□□ 0.29
USP39-202ENST00000409025 WDPCPO95876 746 aa16.85■□□□□ 0.29
USP39-202ENST00000409025 EIF4EP06730 217 aaKnown RBP16.85■□□□□ 0.29
USP39-202ENST00000409025 CLDN20P56880 219 aa16.85■□□□□ 0.29
USP39-202ENST00000409025 CARD18P57730 90 aa16.85■□□□□ 0.29
USP39-202ENST00000409025 P2RY14Q15391 338 aa16.85■□□□□ 0.29
USP39-202ENST00000409025 STAC2Q6ZMT1 411 aa16.85■□□□□ 0.29
USP39-202ENST00000409025 LINC00696Q6ZRV3 163 aa16.85■□□□□ 0.29
USP39-202ENST00000409025 ESPNLQ6ZVH7 1005 aa16.85■□□□□ 0.29
USP39-202ENST00000409025 OR10AC1Q8NH08 325 aa16.85■□□□□ 0.29
USP39-202ENST00000409025 TSEN15Q8WW01 171 aaKnown RBP16.85■□□□□ 0.29
USP39-202ENST00000409025 PPP1R14BQ96C90 147 aa16.85■□□□□ 0.29
USP39-202ENST00000409025 PRRX2Q99811 253 aa16.85■□□□□ 0.29
USP39-202ENST00000409025 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.85■□□□□ 0.29
USP39-202ENST00000409025 C1orf198Q9H425 327 aa16.85■□□□□ 0.29
USP39-202ENST00000409025 CENPMQ9NSP4 180 aa16.85■□□□□ 0.29
USP39-202ENST00000409025 GLTPQ9NZD2 209 aa16.85■□□□□ 0.29
USP39-202ENST00000409025 POLR1DQ9Y2S0 133 aa16.85■□□□□ 0.29
USP39-202ENST00000409025 V9GY05 133 aa16.85■□□□□ 0.29
USP39-202ENST00000409025 SRSF10O75494 262 aaKnown RBP16.84■□□□□ 0.29
USP39-202ENST00000409025 SNRPBP14678 240 aaKnown RBP16.84■□□□□ 0.29
USP39-202ENST00000409025 ENPP1P22413 925 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 CSNK1A1P48729 337 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 MFAP5Q13361 173 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 GDPD3Q7L5L3 318 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 GGNQ86UU5 652 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 Q8N402 240 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 IL17RDQ8NFM7 739 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 OR51A4Q8NGJ6 313 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 OR6N1Q8NGY5 312 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 OR2AJ1Q8NGZ0 328 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 ZNF671Q8TAW3 534 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 SLC39A7Q92504 469 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 TMEM106AQ96A25 262 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 SLAMF6Q96DU3 332 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 GFI1Q99684 422 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 SF3B5Q9BWJ5 86 aaKnown RBP16.84■□□□□ 0.29
USP39-202ENST00000409025 RHBDL2Q9NX52 303 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 B4GALT7Q9UBV7 327 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 KIAA1549Q9HCM3 1950 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 IFITM5A6NNB3 132 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 H0YC42 278 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 POU3F2P20265 443 aaPredicted RBP16.84■□□□□ 0.29
USP39-202ENST00000409025 TGIF1Q15583 401 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 LRFN4Q6PJG9 635 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 ASB18Q6ZVZ8 466 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 OR4M1Q8NGD0 313 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 OR5H6Q8NGV6 325 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 SNRNP27Q8WVK2 155 aaKnown RBP16.84■□□□□ 0.29
USP39-202ENST00000409025 ZNF385AQ96PM9 386 aaKnown RBP16.84■□□□□ 0.29
USP39-202ENST00000409025 OR2M2Q96R28 347 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 COL25A1Q9BXS0 654 aaPredicted RBP16.84■□□□□ 0.29
USP39-202ENST00000409025 EMC7Q9NPA0 242 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 PLA2G3Q9NZ20 509 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 FBXL3Q9UKT7 428 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 SPATA2Q9UM82 520 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 EMC9Q9Y3B6 208 aa16.84■□□□□ 0.29
USP39-202ENST00000409025 H3BSH0 61 aa16.83■□□□□ 0.28
USP39-202ENST00000409025 LINC01387J3KSC0 135 aa16.83■□□□□ 0.28
USP39-202ENST00000409025 AIPO00170 330 aa16.83■□□□□ 0.28
USP39-202ENST00000409025 SMAD9O15198 467 aaKnown RBP16.83■□□□□ 0.28
USP39-202ENST00000409025 CDAP32320 146 aa16.83■□□□□ 0.28
USP39-202ENST00000409025 EIF1AXP47813 144 aaKnown RBP16.83■□□□□ 0.28
USP39-202ENST00000409025 TAB1Q15750 504 aa16.83■□□□□ 0.28
USP39-202ENST00000409025 KCNMB1Q16558 191 aa16.83■□□□□ 0.28
USP39-202ENST00000409025 AGAP7PQ5VUJ5 663 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms