RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 CD36P16671 472 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 PCBD1P61457 104 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 ACSM1Q08AH1 577 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 MLLT11Q13015 90 aaPredicted RBP12.07□□□□□ -0.48
VAPB-202ENST00000395802 GUSBP1Q15486 140 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 SGCAQ16586 387 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 CEACAM16Q2WEN9 425 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 CDONQ4KMG0 1287 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 ARMCX4Q5H9R4 360 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 FAM27BQ5VT28 67 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 DEGS2Q6QHC5 323 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 ZNF322Q6U7Q0 402 aaPredicted RBP12.07□□□□□ -0.48
VAPB-202ENST00000395802 ATCAYQ86WG3 371 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 THEM6Q8WUY1 208 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 C1orf198Q9H425 327 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 SLC7A10Q9NS82 523 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 TMEM38BQ9NVV0 291 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 CYB5R1Q9UHQ9 305 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 TMIGD3P0DMS9 266 aaPredicted RBP12.07□□□□□ -0.48
VAPB-202ENST00000395802 OR8G3PP0DMU2 310 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 RGS6P49758 472 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 ZNF85Q03923 595 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 AQP6Q13520 282 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 EIF2B1Q14232 305 aaKnown RBP12.07□□□□□ -0.48
VAPB-202ENST00000395802 PHYHD1Q5SRE7 291 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 TMEM211Q6ICI0 200 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 NUFIP2Q7Z417 695 aaKnown RBP12.07□□□□□ -0.48
VAPB-202ENST00000395802 SYT9Q86SS6 491 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 DOLPP1Q86YN1 238 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 GCNT2Q8N0V5 402 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 ZNF485Q8NCK3 441 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 GJC3Q8NFK1 279 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 CNTNAP3BQ96NU0 1288 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 OPALINQ96PE5 141 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 SFXN3Q9BWM7 321 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 CNTNAP3Q9BZ76 1288 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 C12orf49Q9H741 205 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 BABAM2Q9NXR7 383 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 PROCRQ9UNN8 238 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 UGT2A1Q9Y4X1 527 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 FAM215AQ9Y5M1 114 aa12.07□□□□□ -0.48
VAPB-202ENST00000395802 A0A1W2PPW3 197 aa12.06□□□□□ -0.48
VAPB-202ENST00000395802 ZNHIT1O43257 154 aa12.06□□□□□ -0.48
VAPB-202ENST00000395802 ZNF254O75437 659 aa12.06□□□□□ -0.48
VAPB-202ENST00000395802 SCG5P05408 212 aa12.06□□□□□ -0.48
VAPB-202ENST00000395802 NR4A1P22736 598 aa12.06□□□□□ -0.48
VAPB-202ENST00000395802 MPGP29372 298 aa12.06□□□□□ -0.48
VAPB-202ENST00000395802 CDAP32320 146 aa12.06□□□□□ -0.48
VAPB-202ENST00000395802 GBX2P52951 348 aaPredicted RBP12.06□□□□□ -0.48
VAPB-202ENST00000395802 FAPQ12884 760 aa12.06□□□□□ -0.48
VAPB-202ENST00000395802 CCDC58Q4VC31 144 aa12.06□□□□□ -0.48
VAPB-202ENST00000395802 PRR30Q53SZ7 412 aaPredicted RBP12.06□□□□□ -0.48
VAPB-202ENST00000395802 RTL6Q6ICC9 239 aa12.06□□□□□ -0.48
VAPB-202ENST00000395802 ZNF544Q6NX49 715 aa12.06□□□□□ -0.48
VAPB-202ENST00000395802 LYPD4Q6UWN0 246 aa12.06□□□□□ -0.48
VAPB-202ENST00000395802 DPPA2Q7Z7J5 298 aa12.06□□□□□ -0.48
VAPB-202ENST00000395802 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.06□□□□□ -0.48
VAPB-202ENST00000395802 GATAD2BQ8WXI9 593 aa12.06□□□□□ -0.48
VAPB-202ENST00000395802 FOXN4Q96NZ1 517 aa12.06□□□□□ -0.48
VAPB-202ENST00000395802 PLSCR4Q9NRQ2 329 aa12.06□□□□□ -0.48
VAPB-202ENST00000395802 METTL15A6NJ78 407 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 J3QLW9 94 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 MPZL1O95297 269 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 GPANK1O95872 356 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 IGHV3-9P01782 118 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 CST2P09228 141 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 ZNF19P17023 458 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 OPRM1P35372 400 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 KIR2DL2P43627 348 aaPredicted RBP12.05□□□□□ -0.48
VAPB-202ENST00000395802 ROM1Q03395 351 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 NFATC3Q12968 1075 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 GPR50Q13585 617 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 SSX1Q16384 188 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 MEP1BQ16820 701 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 OR2G6Q5TZ20 316 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 TFAP2EQ6VUC0 442 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 Q6ZT83 130 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 ZNF627Q7L945 461 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 DCXRQ7Z4W1 244 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 KRT77Q7Z794 578 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.05□□□□□ -0.48
VAPB-202ENST00000395802 ZNF679Q8IYX0 411 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 OR52N5Q8NH56 324 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 SPRYD4Q8WW59 207 aaPredicted RBP12.05□□□□□ -0.48
VAPB-202ENST00000395802 UFD1Q92890 307 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 C4orf36Q96KX1 117 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 ASH2LQ9UBL3 628 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 GNG8Q9UK08 70 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 IKZF2Q9UKS7 526 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 COPS3Q9UNS2 423 aa12.05□□□□□ -0.48
VAPB-202ENST00000395802 VGLL3A8MV65 326 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 CCRL2O00421 344 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 CD8BP10966 210 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 CTSSP25774 331 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 CEACAM8P31997 349 aaPredicted RBP12.04□□□□□ -0.48
VAPB-202ENST00000395802 CD79BP40259 229 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 HCCSP53701 268 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 SIRPAP78324 504 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 SCRN3Q0VDG4 424 aa12.04□□□□□ -0.48
VAPB-202ENST00000395802 TSTQ16762 297 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms