RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 LCTLQ6UWM7 567 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 LDLRAD3Q86YD5 345 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 LINC01555Q8NAE3 123 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 AVL9Q8NBF6 648 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 AKR7LQ8NHP1 331 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 FAM213BQ8TBF2 198 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 GPR119Q8TDV5 335 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 MEGF10Q96KG7 1140 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 PCBD2Q9H0N5 130 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 LRIT1Q9P2V4 623 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 KCND3Q9UK17 655 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 OR51B4Q9Y5P0 310 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 C2orf16Q68DN1 1984 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 MFSD2BA6NFX1 497 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 C17orf51A8MQB3 221 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 FGF17O60258 216 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 SPI1P17947 270 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 HRH1P35367 487 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 NANOS3P60323 173 aaKnown RBP8.02□□□□□ -1.13
RTN4-206ENST00000394611 CSNK2A1P68400 391 aaPredicted RBP8.02□□□□□ -1.13
RTN4-206ENST00000394611 DHRS2Q13268 280 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 KLF9Q13886 244 aaPredicted RBP8.02□□□□□ -1.13
RTN4-206ENST00000394611 ABCA11PQ4W5N1 156 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 SFTPA2Q8IWL1 248 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 CSNK2A3Q8NEV1 391 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 TMIEQ8NEW7 156 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 OR1M1Q8NGA1 313 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 SGK3Q96BR1 496 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 MS4A6EQ96DS6 147 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 ALG14Q96F25 216 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 ZC3HAV1LQ96H79 300 aaKnown RBP8.02□□□□□ -1.13
RTN4-206ENST00000394611 SSX3Q99909 188 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 CRLF2Q9HC73 371 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 KCNJ16Q9NPI9 418 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 PTTG3PQ9NZH4 202 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 NOTCH4Q99466 2003 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 NAP1L6A6NFF2 107 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 PRRT4C9JH25 899 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 RNF224P0DH78 156 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 RCC1P18754 421 aaPredicted RBP8.02□□□□□ -1.13
RTN4-206ENST00000394611 IKZF1Q13422 519 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 PPP1R1AQ13522 171 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 GPR18Q14330 331 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 FCRL6Q6DN72 434 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 RGS7BPQ6MZT1 257 aaPredicted RBP8.02□□□□□ -1.13
RTN4-206ENST00000394611 SLC48A1Q6P1K1 146 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 Q6ZRG5 221 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 C12orf40Q86WS4 652 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 OR5M9Q8NGP3 310 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 CLCC1Q96S66 551 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 KCNJ15Q99712 375 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 IL21Q9HBE4 155 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 HS3ST2Q9Y278 367 aa8.02□□□□□ -1.13
RTN4-206ENST00000394611 SCDO00767 359 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 GABRR1P24046 479 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 HSD11B1P28845 292 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 IL12BP29460 328 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 ZP2Q05996 745 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 PAPD4Q6PIY7 484 aaKnown RBP8.01□□□□□ -1.13
RTN4-206ENST00000394611 KIRREL2Q6UWL6 708 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 ARIH2OSQ8N7S6 290 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 NECAP1Q8NC96 275 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 OR51A2Q8NGJ7 313 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 SETD7Q8WTS6 366 aaKnown RBP8.01□□□□□ -1.13
RTN4-206ENST00000394611 MITD1Q8WV92 249 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 RSPO3Q9BXY4 272 aaPredicted RBP8.01□□□□□ -1.13
RTN4-206ENST00000394611 SFXN1Q9H9B4 322 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 TMED7Q9Y3B3 224 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 NCOR1O75376 2440 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 RBMXL2O75526 392 aaKnown RBP8.01□□□□□ -1.13
RTN4-206ENST00000394611 C1QL1O75973 258 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 SCAF4O95104 1147 aaKnown RBP8.01□□□□□ -1.13
RTN4-206ENST00000394611 SFTA3P0C7M3 94 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 OR2T7P0C7T2 308 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 ZNF16P17020 682 aaPredicted RBP8.01□□□□□ -1.13
RTN4-206ENST00000394611 RORAP35398 523 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 FUT5Q11128 374 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 HAGHQ16775 308 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 TMPPEQ6ZT21 453 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 OR2T27Q8NH04 317 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 DGAT2Q96PD7 388 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 ISYNA1Q9NPH2 558 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 ZFP57Q9NU63 452 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 FOXJ3Q9UPW0 622 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 COLEC10Q9Y6Z7 277 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 NBASA2RRP1 2371 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 OR5K3A6NET4 321 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 HSPB6O14558 160 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 NDUFB6O95139 128 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 CNOT4O95628 575 aaKnown RBP8.01□□□□□ -1.13
RTN4-206ENST00000394611 HNRNPA1P09651 372 aaKnown RBP eCLIP8.01□□□□□ -1.133e-6■□□□□ 10.5
RTN4-206ENST00000394611 H2BFMP0C1H6 154 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 MAOAP21397 527 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 FOXL2P58012 376 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 RPS4XP62701 263 aaKnown RBP8.01□□□□□ -1.13
RTN4-206ENST00000394611 ALKBH1Q13686 389 aaKnown RBP8.01□□□□□ -1.13
RTN4-206ENST00000394611 PDCD1Q15116 288 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 SP6Q3SY56 376 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 TTC9Q92623 222 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 FGGYQ96C11 551 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms