RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 AGFG1P52594 562 aaKnown RBP14.9□□□□□ -0.02
SAMM50-201ENST00000350028 DSCR4P56555 118 aaPredicted RBP14.9□□□□□ -0.02
SAMM50-201ENST00000350028 CLDN12P56749 244 aa14.9□□□□□ -0.02
SAMM50-201ENST00000350028 CLRN1P58418 232 aa14.9□□□□□ -0.02
SAMM50-201ENST00000350028 MRPS10P82664 201 aaKnown RBP14.9□□□□□ -0.02
SAMM50-201ENST00000350028 C19orf57Q0VDD7 668 aa14.9□□□□□ -0.02
SAMM50-201ENST00000350028 DYRK1AQ13627 763 aa14.9□□□□□ -0.02
SAMM50-201ENST00000350028 ZNF704Q6ZNC4 412 aaPredicted RBP14.9□□□□□ -0.02
SAMM50-201ENST00000350028 TMPPEQ6ZT21 453 aa14.9□□□□□ -0.02
SAMM50-201ENST00000350028 MDGA2Q7Z553 956 aa14.9□□□□□ -0.02
SAMM50-201ENST00000350028 NOXO1Q8NFA2 376 aa14.9□□□□□ -0.02
SAMM50-201ENST00000350028 OR6X1Q8NH79 312 aa14.9□□□□□ -0.02
SAMM50-201ENST00000350028 SYNPRQ8TBG9 265 aa14.9□□□□□ -0.02
SAMM50-201ENST00000350028 C11orf40Q8WZ69 217 aa14.9□□□□□ -0.02
SAMM50-201ENST00000350028 HAVCR1Q96D42 359 aa14.9□□□□□ -0.02
SAMM50-201ENST00000350028 SLC25A44Q96H78 314 aaPredicted RBP14.9□□□□□ -0.02
SAMM50-201ENST00000350028 DPAGT1Q9H3H5 408 aa14.9□□□□□ -0.02
SAMM50-201ENST00000350028 NEK6Q9HC98 313 aa14.9□□□□□ -0.02
SAMM50-201ENST00000350028 HPF1Q9NWY4 346 aa14.9□□□□□ -0.02
SAMM50-201ENST00000350028 FOXJ3Q9UPW0 622 aa14.9□□□□□ -0.02
SAMM50-201ENST00000350028 AQP7P3A6NL99 342 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 SULT2B1O00204 365 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 TRAF3IP2O43734 574 aaPredicted RBP14.89□□□□□ -0.03
SAMM50-201ENST00000350028 PMS2P2O95744 297 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 WNT11O96014 354 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 ADRB1P08588 477 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 LIFP15018 202 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 SFTPDP35247 375 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.89□□□□□ -0.03
SAMM50-201ENST00000350028 LINC00346Q8IVM7 164 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 SIAH3Q8IW03 269 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 OR1J4Q8NGS1 313 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 RNF133Q8WVZ7 376 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 TAAR9Q96RI9 348 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 PROK2Q9HC23 129 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 COPZ2Q9P299 210 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 POU2F3Q9UKI9 436 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 FREM3P0C091 2139 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 PRR33A8MZF0 331 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 GABARAPH6UMI1 98 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 GALR2O43603 387 aaPredicted RBP14.89□□□□□ -0.03
SAMM50-201ENST00000350028 ISG15P05161 165 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 H2BFMP0C1H6 154 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 PGA4P0DJD7 388 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 PGA3P0DJD8 388 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 ZNF43P17038 809 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 ACHEP22303 614 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 DCTDP32321 178 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 BTCP35070 178 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 SRP9P49458 86 aaKnown RBP14.89□□□□□ -0.03
SAMM50-201ENST00000350028 CHAF1BQ13112 559 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 SSPNQ14714 243 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 LINGO2Q7L985 606 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 PRSS45Q7RTY3 260 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 PPP1R32Q7Z5V6 425 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 IZUMO1Q8IYV9 350 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 DNAAF1Q8NEP3 725 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 ASB5Q8WWX0 329 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 PPP1R14AQ96A00 147 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 SGCZQ96LD1 299 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 G6PC2Q9NQR9 355 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 OR52A1Q9UKL2 312 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 TCFL5Q9UL49 500 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 HHLA2Q9UM44 414 aa14.89□□□□□ -0.03
SAMM50-201ENST00000350028 FSTP19883 344 aa14.88□□□□□ -0.03
SAMM50-201ENST00000350028 TCN2P20062 427 aa14.88□□□□□ -0.03
SAMM50-201ENST00000350028 CSRP1P21291 193 aaKnown RBP14.88□□□□□ -0.03
SAMM50-201ENST00000350028 CAMK2DQ13557 499 aa14.88□□□□□ -0.03
SAMM50-201ENST00000350028 KLF9Q13886 244 aaPredicted RBP14.88□□□□□ -0.03
SAMM50-201ENST00000350028 ZFP69Q49AA0 526 aa14.88□□□□□ -0.03
SAMM50-201ENST00000350028 RNASE12Q5GAN4 147 aaKnown RBP14.88□□□□□ -0.03
SAMM50-201ENST00000350028 TMEM244Q5VVB8 128 aa14.88□□□□□ -0.03
SAMM50-201ENST00000350028 TIGD3Q6B0B8 471 aa14.88□□□□□ -0.03
SAMM50-201ENST00000350028 SLC25A47Q6Q0C1 308 aa14.88□□□□□ -0.03
SAMM50-201ENST00000350028 RAB11FIP2Q7L804 512 aa14.88□□□□□ -0.03
SAMM50-201ENST00000350028 GPAT4Q86UL3 456 aa14.88□□□□□ -0.03
SAMM50-201ENST00000350028 ZNF486Q96H40 463 aaPredicted RBP14.88□□□□□ -0.03
SAMM50-201ENST00000350028 TMEM41AQ96HV5 264 aa14.88□□□□□ -0.03
SAMM50-201ENST00000350028 DDA1Q9BW61 102 aa14.88□□□□□ -0.03
SAMM50-201ENST00000350028 C1orf198Q9H425 327 aa14.88□□□□□ -0.03
SAMM50-201ENST00000350028 DDX28Q9NUL7 540 aaKnown RBP14.88□□□□□ -0.03
SAMM50-201ENST00000350028 CKLFQ9UBR5 152 aa14.88□□□□□ -0.03
SAMM50-201ENST00000350028 FARSAQ9Y285 508 aaKnown RBP14.88□□□□□ -0.03
SAMM50-201ENST00000350028 EMC9Q9Y3B6 208 aa14.88□□□□□ -0.03
SAMM50-201ENST00000350028 N6AMT1Q9Y5N5 214 aa14.88□□□□□ -0.03
SAMM50-201ENST00000350028 NUBP2Q9Y5Y2 271 aa14.88□□□□□ -0.03
SAMM50-201ENST00000350028 EML6Q6ZMW3 1958 aa14.88□□□□□ -0.03
SAMM50-201ENST00000350028 TMEM269A0A1B0GVZ9 245 aa14.87□□□□□ -0.03
SAMM50-201ENST00000350028 ZNF726A6NNF4 738 aa14.87□□□□□ -0.03
SAMM50-201ENST00000350028 H3BSH0 61 aa14.87□□□□□ -0.03
SAMM50-201ENST00000350028 TLX3O43711 291 aaPredicted RBP14.87□□□□□ -0.03
SAMM50-201ENST00000350028 CBR3O75828 277 aa14.87□□□□□ -0.03
SAMM50-201ENST00000350028 KRT33AO76009 404 aa14.87□□□□□ -0.03
SAMM50-201ENST00000350028 ECDO95905 644 aaPredicted RBP14.87□□□□□ -0.03
SAMM50-201ENST00000350028 DHFRP00374 187 aa14.87□□□□□ -0.03
SAMM50-201ENST00000350028 HPP00738 406 aa14.87□□□□□ -0.03
SAMM50-201ENST00000350028 ARSBP15848 533 aa14.87□□□□□ -0.03
SAMM50-201ENST00000350028 OTX2P32243 289 aa14.87□□□□□ -0.03
SAMM50-201ENST00000350028 GDNFP39905 211 aa14.87□□□□□ -0.03
SAMM50-201ENST00000350028 PTH2RP49190 550 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms