RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 GAREM2Q75VX8 874 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 TGIF2LXQ8IUE1 241 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 NECAP2Q9NVZ3 263 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 ZNF586Q9NXT0 402 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 TRAPPC4Q9Y296 219 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 CORINQ9Y5Q5 1042 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 CICQ96RK0 1608 aaPredicted RBP11.11□□□□□ -0.63
PCF11-201ENST00000298281 MBLAC1A4D2B0 266 aaPredicted RBP11.11□□□□□ -0.63
PCF11-201ENST00000298281 SLC25A6P12236 298 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 HSF5Q4G112 596 aaPredicted RBP11.11□□□□□ -0.63
PCF11-201ENST00000298281 ETFRF1Q6IPR1 90 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 RELL2Q8NC24 303 aaPredicted RBP11.11□□□□□ -0.63
PCF11-201ENST00000298281 ZNF583Q96ND8 569 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 KPTNQ9Y664 436 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 DFFBO76075 338 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 C17orf67Q0P5P2 114 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 C18orf21Q32NC0 220 aaPredicted RBP11.11□□□□□ -0.63
PCF11-201ENST00000298281 Q3ZCU0 254 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 OR1L4Q8NGR5 311 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 WDR83Q9BRX9 315 aaKnown RBP11.11□□□□□ -0.63
PCF11-201ENST00000298281 TRIP12Q14669 1992 aaPredicted RBP11.11□□□□□ -0.63
PCF11-201ENST00000298281 CABIN1Q9Y6J0 2220 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 IGKV3-7A0A075B6H7 116 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 GPR31O00270 319 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 GPR171O14626 319 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 OR2T7P0C7T2 308 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 FKBP2P26885 142 aaKnown RBP11.11□□□□□ -0.63
PCF11-201ENST00000298281 APEX1P27695 318 aaKnown RBP11.11□□□□□ -0.63
PCF11-201ENST00000298281 SULT1A2P50226 295 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 ADIPOQQ15848 244 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 IQCJQ1A5X6 159 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 HSD11B1LQ7Z5J1 315 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 UBE3DQ7Z6J8 389 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 PHYHIPQ92561 330 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 TEX50A0A1B0GTY4 177 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 SH2D1BO14796 132 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 C1orf220Q5T0J3 134 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 LDLRAD1Q5T700 205 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 DLK2Q6UY11 383 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 GABRG1Q8N1C3 465 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 SIMC1Q8NDZ2 872 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 MACROD1Q9BQ69 325 aa11.11□□□□□ -0.63
PCF11-201ENST00000298281 RGPD8O14715 1765 aaPredicted RBP11.1□□□□□ -0.63
PCF11-201ENST00000298281 ACOT8O14734 319 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 C21orf33P30042 268 aaPredicted RBP11.1□□□□□ -0.63
PCF11-201ENST00000298281 RAB38P57729 211 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 GGTA1PQ4G0N0 100 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 LACC1Q8IV20 430 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 KCNG3Q8TAE7 436 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 MOCOSQ96EN8 888 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 MISP3Q96FF7 219 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 CPPED1Q9BRF8 314 aaPredicted RBP11.1□□□□□ -0.63
PCF11-201ENST00000298281 BCO1Q9HAY6 547 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 CBY1Q9Y3M2 126 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 ZNFX1Q9P2E3 1918 aaKnown RBP11.1□□□□□ -0.63
PCF11-201ENST00000298281 PIK3C2AO00443 1686 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 CSF3P09919 207 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 FAHP16930 419 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 OR1D4P47884 311 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 ZNF691Q5VV52 312 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 NKAIN2Q5VXU1 208 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 SLC35D2Q76EJ3 337 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 SCD5Q86SK9 330 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 UBALD1Q8TB05 177 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 KHSRPQ92945 711 aaKnown RBP eCLIP11.1□□□□□ -0.631e-6■■■□□ 17
PCF11-201ENST00000298281 C14orf79Q96F83 325 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 KIRREL1Q96J84 757 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 CHD3Q12873 2000 aaKnown RBP11.1□□□□□ -0.63
PCF11-201ENST00000298281 SELEP16581 610 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 RPS23P62266 143 aaKnown RBP11.1□□□□□ -0.63
PCF11-201ENST00000298281 CLLU1OSQ5K130 101 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 SPANXN5Q5MJ07 72 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 HENMT1Q5T8I9 393 aaKnown RBP11.1□□□□□ -0.63
PCF11-201ENST00000298281 C17orf78Q8N4C9 275 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 MFSD9Q8NBP5 474 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 OR4F15Q8NGB8 312 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 ZNF480Q8WV37 535 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 SLC30A3Q99726 388 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 CHRDL1Q9BU40 450 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 IL37Q9NZH6 218 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 SSSCA1O60232 199 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 F13BP05160 661 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 IVDP26440 423 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 SSTR2P30874 369 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 TREX1Q9NSU2 369 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 RNF24Q9Y225 148 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 ZNF593O00488 134 aaPredicted RBP11.1□□□□□ -0.63
PCF11-201ENST00000298281 ALOX12BO75342 701 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 CD200P41217 278 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 PGGT1BP53609 377 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 CSNK1G2P78368 415 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 ZXDBP98169 803 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 TAZQ16635 292 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.1□□□□□ -0.633e-7■■■■□ 22.5
PCF11-201ENST00000298281 PARS2Q7L3T8 475 aaKnown RBP11.1□□□□□ -0.63
PCF11-201ENST00000298281 MRPL43Q8N983 215 aaKnown RBP11.1□□□□□ -0.63
PCF11-201ENST00000298281 NUDT10Q8NFP7 164 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 BCL2L2Q92843 193 aaPredicted RBP11.1□□□□□ -0.63
PCF11-201ENST00000298281 NUDT11Q96G61 164 aa11.1□□□□□ -0.63
PCF11-201ENST00000298281 CITED2Q99967 270 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms