RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 ZNF547Q8IVP9 402 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 DND1Q8IYX4 353 aaKnown RBP14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 C2orf73Q8N5S3 287 aaPredicted RBP14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 SLC22A18Q96BI1 424 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 ZBTB8AQ96BR9 441 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 TIFAQ96CG3 184 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 GPR174Q9BXC1 333 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 MFRPQ9BY79 579 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 GNG8Q9UK08 70 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 HDGFL3Q9Y3E1 203 aa14.23□□□□□ -0.13
CTDSP1-201ENST00000273062 A6NNC1 897 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 BHLHE40O14503 412 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 LTBQ06643 244 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 GPM6BQ13491 265 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 HNRNPA1L2Q32P51 320 aaKnown RBP14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 AARDQ4LEZ3 155 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 ZNF658BQ4V348 819 aaPredicted RBP14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 ZNF311Q5JNZ3 666 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 POMZP3Q6PJE2 187 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 MBOAT2Q6ZWT7 520 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 SLC35F3Q8IY50 421 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 CDK20Q8IZL9 346 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 PNLDC1Q8NA58 520 aaKnown RBP14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 NAXEQ8NCW5 288 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 CCDC107Q8WV48 283 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 NUS1Q96E22 293 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 ZMYND19Q96E35 227 aaPredicted RBP14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 ARSGQ96EG1 525 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 TMEM208Q9BTX3 173 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 DDA1Q9BW61 102 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 DEC1Q9P2X7 70 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 ICKQ9UPZ9 632 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 GOLT1BQ9Y3E0 138 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 C2orf16Q68DN1 1984 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 OR5H15A6NDH6 313 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 OR5H1A6NKK0 313 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 FOXE1O00358 373 aaPredicted RBP14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 MPZP25189 248 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 TSFMP43897 325 aaKnown RBP14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 CRMP1Q14194 572 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 AGERQ15109 404 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 ZNF343Q6P1L6 599 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 KCTD9Q7L273 389 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 POC1BQ8TC44 478 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 ZNF480Q8WV37 535 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 ASB17Q8WXJ9 295 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 FOXRED1Q96CU9 486 aaPredicted RBP14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 RNF126Q9BV68 326 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 KCNE5Q9UJ90 142 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 PLAGL1Q9UM63 463 aa14.22□□□□□ -0.13
CTDSP1-201ENST00000273062 CEP290O15078 2479 aa14.21□□□□□ -0.13
CTDSP1-201ENST00000273062 TRAV18A0A075B6X5 111 aa14.21□□□□□ -0.13
CTDSP1-201ENST00000273062 TMEM235A6NFC5 223 aa14.21□□□□□ -0.13
CTDSP1-201ENST00000273062 H7BY64 318 aa14.21□□□□□ -0.13
CTDSP1-201ENST00000273062 PAPLNO95428 1278 aa14.21□□□□□ -0.13
CTDSP1-201ENST00000273062 C1orf105O95561 183 aa14.21□□□□□ -0.13
CTDSP1-201ENST00000273062 PRNPP04156 253 aa14.21□□□□□ -0.13
CTDSP1-201ENST00000273062 RAB4AP20338 218 aa14.21□□□□□ -0.13
CTDSP1-201ENST00000273062 RAB6AP20340 208 aa14.21□□□□□ -0.13
CTDSP1-201ENST00000273062 WASP42768 502 aa14.21□□□□□ -0.13
CTDSP1-201ENST00000273062 GPR1P46091 355 aa14.21□□□□□ -0.13
CTDSP1-201ENST00000273062 TBPL1P62380 186 aa14.21□□□□□ -0.13
CTDSP1-201ENST00000273062 PPP1R1AQ13522 171 aa14.21□□□□□ -0.13
CTDSP1-201ENST00000273062 COTL1Q14019 142 aa14.21□□□□□ -0.13
CTDSP1-201ENST00000273062 LANCL3Q6ZV70 420 aa14.21□□□□□ -0.13
CTDSP1-201ENST00000273062 RTL10Q7L3V2 364 aa14.21□□□□□ -0.13
CTDSP1-201ENST00000273062 TMPRSS12Q86WS5 348 aa14.21□□□□□ -0.13
CTDSP1-201ENST00000273062 FOXRED2Q8IWF2 684 aa14.21□□□□□ -0.13
CTDSP1-201ENST00000273062 GABRG1Q8N1C3 465 aa14.21□□□□□ -0.13
CTDSP1-201ENST00000273062 CASTOR1Q8WTX7 329 aa14.21□□□□□ -0.13
CTDSP1-201ENST00000273062 WDR92Q96MX6 357 aa14.21□□□□□ -0.13
CTDSP1-201ENST00000273062 INPP5EQ9NRR6 644 aa14.21□□□□□ -0.13
CTDSP1-201ENST00000273062 C20orf141Q9NUB4 165 aa14.21□□□□□ -0.13
CTDSP1-201ENST00000273062 PRODH2Q9UF12 536 aa14.21□□□□□ -0.13
CTDSP1-201ENST00000273062 SLC22A31A6NKX4 558 aa14.21□□□□□ -0.14
CTDSP1-201ENST00000273062 RPL36A-HNRNPH2H7BZ11 118 aa14.21□□□□□ -0.14
CTDSP1-201ENST00000273062 AK1P00568 194 aa14.21□□□□□ -0.14
CTDSP1-201ENST00000273062 CATP04040 527 aaKnown RBP14.21□□□□□ -0.14
CTDSP1-201ENST00000273062 SLC2A1P11166 492 aa14.21□□□□□ -0.14
CTDSP1-201ENST00000273062 PBX2P40425 430 aa14.21□□□□□ -0.14
CTDSP1-201ENST00000273062 RAP1AP62834 184 aa14.21□□□□□ -0.14
CTDSP1-201ENST00000273062 NAAAQ02083 359 aa14.21□□□□□ -0.14
CTDSP1-201ENST00000273062 GPR137CQ8N3F9 429 aa14.21□□□□□ -0.14
CTDSP1-201ENST00000273062 ACBD4Q8NC06 268 aa14.21□□□□□ -0.14
CTDSP1-201ENST00000273062 IL17FQ96PD4 163 aa14.21□□□□□ -0.14
CTDSP1-201ENST00000273062 FAM83CQ9BQN1 747 aa14.21□□□□□ -0.14
CTDSP1-201ENST00000273062 EPHX3Q9H6B9 360 aa14.21□□□□□ -0.14
CTDSP1-201ENST00000273062 OR14J1Q9UGF5 321 aa14.21□□□□□ -0.14
CTDSP1-201ENST00000273062 KCNG2Q9UJ96 466 aa14.21□□□□□ -0.14
CTDSP1-201ENST00000273062 C13orf42A0A1B0GVH6 325 aa14.2□□□□□ -0.14
CTDSP1-201ENST00000273062 ZNF727A8MUV8 499 aa14.2□□□□□ -0.14
CTDSP1-201ENST00000273062 PPP1R2P9O14990 202 aa14.2□□□□□ -0.14
CTDSP1-201ENST00000273062 AMY2AP04746 511 aa14.2□□□□□ -0.14
CTDSP1-201ENST00000273062 F3P13726 295 aa14.2□□□□□ -0.14
CTDSP1-201ENST00000273062 MAP3K8P41279 467 aa14.2□□□□□ -0.14
CTDSP1-201ENST00000273062 SOX2P48431 317 aa14.2□□□□□ -0.14
CTDSP1-201ENST00000273062 NANOS3P60323 173 aaKnown RBP14.2□□□□□ -0.14
CTDSP1-201ENST00000273062 ST3GAL3Q11203 375 aa14.2□□□□□ -0.14
CTDSP1-201ENST00000273062 ZNF674Q2M3X9 581 aa14.2□□□□□ -0.14
CTDSP1-201ENST00000273062 THEM4Q5T1C6 240 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms